RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 RBP5P82980 135 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 PTP4A2Q12974 167 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 C2CD6Q53TS8 623 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 MMS22LQ6ZRQ5 1243 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 CPNE8Q86YQ8 564 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 KRT222Q8N1A0 295 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 TFAP2BQ92481 460 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 KIF12Q96FN5 646 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 HPDLQ96IR7 371 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 HINFPQ9BQA5 517 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 MTG1Q9BT17 334 aaPredicted RBP15.9■□□□□ 0.14
TPM3-205ENST00000328159 CYP3A43Q9HB55 503 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 PCDHGC3Q9UN70 934 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 DERAQ9Y315 318 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 CCDC66A2RUB6 948 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 STAU1O95793 577 aaKnown RBP15.9■□□□□ 0.14
TPM3-205ENST00000328159 MYBL2P10244 700 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 P4HA1P13674 534 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 CTNNA1P35221 906 aaKnown RBP15.9■□□□□ 0.14
TPM3-205ENST00000328159 CRYBB1P53674 252 aaPredicted RBP15.9■□□□□ 0.14
TPM3-205ENST00000328159 ZNF211Q13398 564 aaPredicted RBP15.9■□□□□ 0.14
TPM3-205ENST00000328159 CLUL1Q15846 466 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 GNASQ5JWF2 1037 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 LLGL2Q6P1M3 1020 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 NME8Q8N427 588 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 TMEM40Q8WWA1 233 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 SNX27Q96L92 541 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 NAP1L3Q99457 506 aaPredicted RBP15.9■□□□□ 0.14
TPM3-205ENST00000328159 UPF3AQ9H1J1 476 aaKnown RBP15.9■□□□□ 0.14
TPM3-205ENST00000328159 SMYD3Q9H7B4 428 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 PCDHA3Q9Y5H8 950 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 RAD51CO43502 376 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 HEXIM1O94992 359 aaKnown RBP15.89■□□□□ 0.13
TPM3-205ENST00000328159 PAEPP09466 180 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 ITGA4P13612 1032 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 MMP8P22894 467 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 TNFRSF8P28908 595 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 PLA2G4AP47712 749 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 YARSP54577 528 aaKnown RBP15.89■□□□□ 0.13
TPM3-205ENST00000328159 RAD23BP54727 409 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 CDH8P55286 799 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 CBX1P83916 185 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 PLEKHA7Q6IQ23 1121 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 GSPT2Q8IYD1 628 aaKnown RBP15.89■□□□□ 0.13
TPM3-205ENST00000328159 TMEM35BQ8NCS4 154 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 TRIM7Q9C029 511 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 ZNF518BQ9C0D4 1074 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 MRPL47Q9HD33 250 aaKnown RBP15.89■□□□□ 0.13
TPM3-205ENST00000328159 SCINQ9Y6U3 715 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 SCN10AQ9Y5Y9 1956 aa15.89■□□□□ 0.13
TPM3-205ENST00000328159 PDCD11Q14690 1871 aaKnown RBP15.88■□□□□ 0.13
TPM3-205ENST00000328159 CASP8AP2Q9UKL3 1982 aa15.88■□□□□ 0.13
TPM3-205ENST00000328159 CALB1P05937 261 aa15.88■□□□□ 0.13
TPM3-205ENST00000328159 GLI1P08151 1106 aa15.88■□□□□ 0.13
TPM3-205ENST00000328159 CD19P15391 556 aa15.88■□□□□ 0.13
TPM3-205ENST00000328159 CDH5P33151 784 aaPredicted RBP15.88■□□□□ 0.13
TPM3-205ENST00000328159 PRKCZQ05513 592 aa15.88■□□□□ 0.13
TPM3-205ENST00000328159 MAMLD1Q13495 774 aa15.88■□□□□ 0.13
TPM3-205ENST00000328159 CASP8Q14790 479 aa15.88■□□□□ 0.13
TPM3-205ENST00000328159 IFT20Q8IY31 132 aa15.88■□□□□ 0.13
TPM3-205ENST00000328159 C1orf131Q8NDD1 294 aaKnown RBP15.88■□□□□ 0.13
TPM3-205ENST00000328159 AENQ8WTP8 325 aaKnown RBP15.88■□□□□ 0.13
TPM3-205ENST00000328159 TRIM6Q9C030 488 aaPredicted RBP15.88■□□□□ 0.13
TPM3-205ENST00000328159 CXCL16Q9H2A7 254 aa15.88■□□□□ 0.13
TPM3-205ENST00000328159 GDF3Q9NR23 364 aa15.88■□□□□ 0.13
TPM3-205ENST00000328159 PIN4Q9Y237 131 aaKnown RBP15.88■□□□□ 0.13
TPM3-205ENST00000328159 MYO1FO00160 1098 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 MED7O43513 233 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 CILPO75339 1184 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 PGK1P00558 417 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 SLC1A1P43005 524 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 NOGQ13253 232 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 TAF2Q6P1X5 1199 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 WHAMMQ8TF30 809 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 ELOVL4Q9GZR5 314 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 DDX47Q9H0S4 455 aaKnown RBP15.87■□□□□ 0.13
TPM3-205ENST00000328159 NXF3Q9H4D5 531 aaKnown RBP15.87■□□□□ 0.13
TPM3-205ENST00000328159 SLITRK6Q9H5Y7 841 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 SPC25Q9HBM1 224 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 PARVAQ9NVD7 372 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 HES2Q9Y543 173 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 CEP83Q9Y592 693 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 SEPT4O43236 478 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 SART1O43290 800 aaKnown RBP15.87■□□□□ 0.13
TPM3-205ENST00000328159 PROSCO94903 275 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 TNNT3P45378 269 aaPredicted RBP15.87■□□□□ 0.13
TPM3-205ENST00000328159 RWDD2BP57060 319 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 GUCY2DQ02846 1103 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 TRIM32Q13049 653 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 ZBTB6Q15916 424 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 NBPF20Q3BBV1 942 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 SEL1L2Q5TEA6 688 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 AADACL2Q6P093 401 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 DENND1BQ6P3S1 775 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 CXCL17Q6UXB2 119 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 WDTC1Q8N5D0 677 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 SLC4A11Q8NBS3 891 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 ZMAT2Q96NC0 199 aaKnown RBP15.87■□□□□ 0.13
TPM3-205ENST00000328159 TWNKQ96RR1 684 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 CELF4Q9BZC1 486 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms