RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 GLIS1Q8NBF1 620 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 PPP2R3CQ969Q6 453 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 DYDC2Q96IM9 177 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 GLT8D2Q9H1C3 349 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 MANSC1Q9H8J5 431 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 VPS37BQ9H9H4 285 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 ETNK2Q9NVF9 386 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 MTO1Q9Y2Z2 717 aaKnown RBP13.49□□□□□ -0.25
CCDC60-201ENST00000327554 DNALI1O14645 258 aaPredicted RBP13.49□□□□□ -0.25
CCDC60-201ENST00000327554 ZBTB39O15060 712 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 MSH4O15457 936 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 BUD23O43709 281 aaKnown RBP13.49□□□□□ -0.25
CCDC60-201ENST00000327554 DLDP09622 509 aaKnown RBP13.49□□□□□ -0.25
CCDC60-201ENST00000327554 PIM1P11309 404 aaPredicted RBP13.49□□□□□ -0.25
CCDC60-201ENST00000327554 SLC1A1P43005 524 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 ZBTB16Q05516 673 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 HNRNPDQ14103 355 aaKnown RBP13.49□□□□□ -0.25
CCDC60-201ENST00000327554 QRICH1Q2TAL8 776 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 CLEC4GQ6UXB4 293 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC60-201ENST00000327554 NET1Q7Z628 596 aaPredicted RBP13.49□□□□□ -0.25
CCDC60-201ENST00000327554 FAM178BQ8IXR5 827 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 ARHGAP24Q8N264 748 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 FBXO27Q8NI29 283 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 TCP10LQ8TDR4 215 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 FAM20AQ96MK3 541 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 PANX3Q96QZ0 392 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 TSSK1BQ9BXA7 367 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 VPS11Q9H270 941 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 EBF3Q9H4W6 596 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 SLC17A7Q9P2U7 560 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 HSFX1Q9UBD0 423 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 C2orf71A6NGG8 1288 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 A6NJR5 290 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 FCHO1O14526 889 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 P4HA2O15460 535 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 GRIN3BO60391 1043 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 BMP3P12645 472 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 CYP11B1P15538 503 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 AP3B2Q13367 1082 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 DLGAP5Q15398 846 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 EFHC2Q5JST6 749 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 GPATCH4Q5T3I0 446 aaKnown RBP13.48□□□□□ -0.25
CCDC60-201ENST00000327554 ACAD10Q6JQN1 1059 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 RIPOR1Q6ZS17 1223 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 ACAD11Q709F0 780 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 ST13P4Q8IZP2 240 aaPredicted RBP13.48□□□□□ -0.25
CCDC60-201ENST00000327554 SHC3Q92529 594 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 HIC2Q96JB3 615 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC60-201ENST00000327554 NDE1Q9NXR1 346 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 SEL1LQ9UBV2 794 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 DNAJB4Q9UDY4 337 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 PCDHA1Q9Y5I3 950 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 GREB1LQ9C091 1923 aaPredicted RBP13.48□□□□□ -0.25
CCDC60-201ENST00000327554 USP1O94782 785 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 ASLP04424 464 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 CPA2P48052 419 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 VAMP7P51809 220 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 MAP3K10Q02779 954 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 GABPAQ06546 454 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 SYDE2Q5VT97 1194 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 PHLDB2Q86SQ0 1253 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 SPATA24Q86W54 205 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 PLEKHO2Q8TD55 490 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 MZB1Q8WU39 189 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 DDX1Q92499 740 aaKnown RBP13.48□□□□□ -0.25
CCDC60-201ENST00000327554 STRA6Q9BX79 667 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
CCDC60-201ENST00000327554 MIS12Q9H081 205 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 PPCSQ9HAB8 311 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 ARMCX1Q9P291 453 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 PPM1HQ9ULR3 514 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 PLA2G4CQ9UP65 541 aa13.48□□□□□ -0.25
CCDC60-201ENST00000327554 LOC102724428A0A0B4J2F2 783 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 B2RBV5 119 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 ALOX15BO15296 676 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 TGDSO95455 350 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 FAM200BP0CF97 657 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 VAV1P15498 845 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 ARL4CP56559 192 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 SIK1P57059 783 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 ACTR3P61158 418 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 CETN1Q12798 172 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 PTP4A2Q12974 167 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 CCDC110Q8TBZ0 833 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 OXNAD1Q96HP4 312 aaPredicted RBP13.47□□□□□ -0.25
CCDC60-201ENST00000327554 HSD17B14Q9BPX1 270 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 ALG13Q9NP73 1137 aaKnown RBP13.47□□□□□ -0.25
CCDC60-201ENST00000327554 GMEB1Q9Y692 573 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 TISP43B9A030 160 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 TM9SF1O15321 606 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 ZSCAN5DPP0CG00 497 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 HARSP12081 509 aaKnown RBP13.47□□□□□ -0.25
CCDC60-201ENST00000327554 ERFP50548 548 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 SH3BGRP55822 239 aaPredicted RBP13.47□□□□□ -0.25
CCDC60-201ENST00000327554 GPX6P59796 221 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 TTLL12Q14166 644 aaPredicted RBP13.47□□□□□ -0.25
CCDC60-201ENST00000327554 MYBPC2Q14324 1141 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 EFTUD2Q15029 972 aaKnown RBP eCLIP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms