RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 ATPAF2Q8N5M1 289 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 FAM96AQ9H5X1 160 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 NSMCE4AQ9NXX6 385 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 SELPP16109 830 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 NR1I3Q14994 352 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 IQCB1Q15051 598 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 RPS6KA2Q15349 733 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 FIBCD1Q8N539 461 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC149-201ENST00000324309 VPS18Q9P253 973 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 CDY2AQ9Y6F7 541 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 EEF2KO00418 725 aaKnown RBP13.47□□□□□ -0.25
CCDC149-201ENST00000324309 AP1G2O75843 785 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 GUCY2DQ02846 1103 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 ENPEPQ07075 957 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 RAPH1Q70E73 1250 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 INTS13Q9NVM9 706 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 BARX2Q9UMQ3 279 aaPredicted RBP13.47□□□□□ -0.25
CCDC149-201ENST00000324309 FOXN1O15353 648 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 CSPG5O95196 566 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 MMP3P08254 477 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 GZMAP12544 262 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 LAG3P18627 525 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 EIF4BP23588 611 aaKnown RBP13.46□□□□□ -0.25
CCDC149-201ENST00000324309 VPS41P49754 854 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 LMBRD2Q68DH5 695 aaPredicted RBP13.46□□□□□ -0.25
CCDC149-201ENST00000324309 CD99L2Q8TCZ2 262 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 FBXO32Q969P5 355 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 GTF3C4Q9UKN8 822 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 GHRP10912 638 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 C10orf120Q5SQS8 335 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 OVOS1Q6IE37 1185 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 DEFB128Q7Z7B8 93 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 GLYCTKQ8IVS8 523 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 NAGPAQ9UK23 515 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 SLC9A3R1O14745 358 aaPredicted RBP13.46□□□□□ -0.25
CCDC149-201ENST00000324309 KRT37O76014 449 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 RASSF2P50749 326 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 GPAT2Q6NUI2 795 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 PPP1R12CQ9BZL4 782 aa13.46□□□□□ -0.25
CCDC149-201ENST00000324309 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.26
CCDC149-201ENST00000324309 CCDC151A5D8V7 595 aa13.46□□□□□ -0.26
CCDC149-201ENST00000324309 MOCS2O96007 188 aaPredicted RBP13.46□□□□□ -0.26
CCDC149-201ENST00000324309 FGGP02679 453 aa13.46□□□□□ -0.26
CCDC149-201ENST00000324309 PDGFRBP09619 1106 aa13.46□□□□□ -0.26
CCDC149-201ENST00000324309 GRIK3Q13003 919 aa13.46□□□□□ -0.26
CCDC149-201ENST00000324309 DGKZQ13574 1117 aa13.46□□□□□ -0.26
CCDC149-201ENST00000324309 HYIQ5T013 277 aa13.46□□□□□ -0.26
CCDC149-201ENST00000324309 TIGD7Q6NT04 549 aaPredicted RBP13.46□□□□□ -0.26
CCDC149-201ENST00000324309 PYROXD1Q8WU10 500 aa13.46□□□□□ -0.26
CCDC149-201ENST00000324309 DEPDC1BQ8WUY9 529 aa13.46□□□□□ -0.26
CCDC149-201ENST00000324309 TSEN34Q9BSV6 310 aaKnown RBP13.46□□□□□ -0.26
CCDC149-201ENST00000324309 TLL2Q9Y6L7 1015 aa13.46□□□□□ -0.26
CCDC149-201ENST00000324309 RPTORQ8N122 1335 aa13.46□□□□□ -0.26
CCDC149-201ENST00000324309 GSTA1P08263 222 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 GSTA2P09210 222 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 RFC2P35250 354 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 POU5F1Q01860 360 aaKnown RBP13.45□□□□□ -0.26
CCDC149-201ENST00000324309 GCNT1Q02742 428 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 PDK2Q15119 407 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 ACAD10Q6JQN1 1059 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 SMARCD1Q96GM5 515 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 MAML3Q96JK9 1138 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 GMLQ99445 158 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 SPON2Q9BUD6 331 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 ABI2Q9NYB9 513 aaPredicted RBP13.45□□□□□ -0.26
CCDC149-201ENST00000324309 KRT38O76015 456 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 SLC12A3P55017 1021 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 CDR2Q01850 454 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 GFPT1Q06210 699 aaPredicted RBP13.45□□□□□ -0.26
CCDC149-201ENST00000324309 LRRC43Q8N309 656 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 TBC1D19Q8N5T2 526 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 PTPN22Q9Y2R2 807 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 C2CD2Q9Y426 696 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 NHSQ6T4R5 1651 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 CHEK2O96017 543 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 IL9RQ01113 521 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 ACCSLQ4AC99 568 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 EMBQ6PCB8 327 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 C7orf43Q8WVR3 580 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 TMEM176AQ96HP8 235 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC149-201ENST00000324309 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.45□□□□□ -0.26
CCDC149-201ENST00000324309 HMGB1P1B2RPK0 211 aaPredicted RBP13.45□□□□□ -0.26
CCDC149-201ENST00000324309 F5H5T6 163 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 MAP3K21Q5TCX8 1036 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 ANKS3Q6ZW76 656 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 SPATS2Q86XZ4 545 aaKnown RBP13.45□□□□□ -0.26
CCDC149-201ENST00000324309 FEZF2Q8TBJ5 459 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 TRIM54Q9BYV2 358 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 CNOT10Q9H9A5 744 aaKnown RBP13.45□□□□□ -0.26
CCDC149-201ENST00000324309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC149-201ENST00000324309 PSTPIP1O43586 416 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 FARP2O94887 1054 aaPredicted RBP13.45□□□□□ -0.26
CCDC149-201ENST00000324309 PTK7Q13308 1070 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 TMCO4Q5TGY1 634 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 ALS2CLQ60I27 953 aa13.45□□□□□ -0.26
CCDC149-201ENST00000324309 C1orf131Q8NDD1 294 aaKnown RBP13.45□□□□□ -0.26
CCDC149-201ENST00000324309 CHAMP1Q96JM3 812 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms