RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PDGFRBP09619 1106 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 HSD17B3P37058 310 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 CYB5R4Q7L1T6 521 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 NLGN1Q8N2Q7 840 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 ERLEC1Q96DZ1 483 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 WNK4Q96J92 1243 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 PLEKHA5Q9HAU0 1116 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 CHKBQ9Y259 395 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 SPTBP11277 2137 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 GSNP06396 782 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 SERPINB5P36952 375 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 REXO1L1PQ8IX06 675 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 CCDC33Q8N5R6 958 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 FARP1Q9Y4F1 1045 aaPredicted RBP8.26□□□□□ -1.09
CIITA-201ENST00000324288 NR5A2O00482 541 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 UPP2O95045 317 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 KLHL2O95198 593 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 SMTNL2Q2TAL5 461 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 E4F1Q66K89 784 aaPredicted RBP8.26□□□□□ -1.09
CIITA-201ENST00000324288 KLHL17Q6TDP4 642 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 LPCAT2Q7L5N7 544 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 AHI1Q8N157 1196 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 IMPAD1Q9NX62 359 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.26□□□□□ -1.09
CIITA-201ENST00000324288 ARHGEF12Q9NZN5 1544 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.26□□□□□ -1.09
CIITA-201ENST00000324288 PCP4L1A6NKN8 68 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 EML3Q32P44 896 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 PKP3Q9Y446 797 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 APRTP07741 180 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 KRT7P08729 469 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 BFSP2Q13515 415 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 KRT73Q86Y46 540 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 DNAJC7Q99615 494 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 TMEM117Q9H0C3 514 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 EML4Q9HC35 981 aaKnown RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 ZMYND8Q9ULU4 1186 aaPredicted RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 PRG3Q9Y2Y8 225 aaPredicted RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 NUP153P49790 1475 aaKnown RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 KRT87PA6NCN2 255 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 MYH1P12882 1939 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 ALDH6A1Q02252 535 aaKnown RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 TNFAIP2Q03169 654 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 ITPRIPL1Q6GPH6 555 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 HS6ST3Q8IZP7 471 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 FLAD1Q8NFF5 587 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 TMEM143Q96AN5 459 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 LATS2Q9NRM7 1088 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 MYH2Q9UKX2 1941 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 STAP1Q9ULZ2 295 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 SCAF8Q9UPN6 1271 aaKnown RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 MYH4Q9Y623 1939 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 DNALI1O14645 258 aaPredicted RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 CYP26A1O43174 497 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 PHF2O75151 1096 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 ATP12AP54707 1039 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 CNGA2Q16280 664 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 TDRD3Q9H7E2 651 aaKnown RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 RNF146Q9NTX7 359 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 TRIM43BA6NCK2 446 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 FLT3P36888 993 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 FAXCQ5TGI0 409 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 CIAPIN1Q6FI81 312 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 TTC23LQ6PF05 361 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 FOXR1Q6PIV2 292 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 PID1Q7Z2X4 250 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 IFNLR1Q8IU57 520 aaPredicted RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 UNC45BQ8IWX7 931 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 CAPSLQ8WWF8 208 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 GRAMD1AQ96CP6 724 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 TOPORSQ9NS56 1045 aaPredicted RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 ABCA1O95477 2261 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 WEE2P0C1S8 567 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 GSSP48637 474 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 MRPS35P82673 323 aaKnown RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 ARL6IP4Q66PJ3 421 aaKnown RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 SIRT2Q8IXJ6 389 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 PABPC5Q96DU9 382 aaKnown RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 RBM15Q96T37 977 aaKnown RBP eCLIP8.25□□□□□ -1.09
CIITA-201ENST00000324288 METTL5Q9NRN9 209 aaKnown RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 TMEM51Q9NW97 253 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 RBAKQ9NYW8 714 aaPredicted RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 APPL1Q9UKG1 709 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 ANO9A1A5B4 782 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 ATP9AO75110 1047 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 MMP10P09238 476 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 CDH2P19022 906 aaPredicted RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 ALCAMQ13740 583 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 STAT4Q14765 748 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 CRYMQ14894 314 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 EPC2Q52LR7 807 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 PPP4R3CPQ6ZMV5 832 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 CHMP1BQ7LBR1 199 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 FAM160B2Q86V87 743 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 CDKL3Q8IVW4 592 aaPredicted RBP8.25□□□□□ -1.09
CIITA-201ENST00000324288 SLC35G2Q8TBE7 412 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 CALML6Q8TD86 181 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 GDPD5Q8WTR4 605 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 MCEEQ96PE7 176 aa8.25□□□□□ -1.09
CIITA-201ENST00000324288 SEPT5Q99719 369 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms