RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ITGA7Q13683 1181 aa19.64■□□□□ 0.74
USP39-201ENST00000323701 RPS6KA1Q15418 735 aa19.64■□□□□ 0.74
USP39-201ENST00000323701 TWF2Q6IBS0 349 aaKnown RBP19.64■□□□□ 0.74
USP39-201ENST00000323701 MON1BQ7L1V2 547 aa19.64■□□□□ 0.74
USP39-201ENST00000323701 RHOT2Q8IXI1 618 aa19.64■□□□□ 0.74
USP39-201ENST00000323701 ELOVL4Q9GZR5 314 aa19.64■□□□□ 0.74
USP39-201ENST00000323701 GOLGA2P5Q9HBQ8 144 aa19.64■□□□□ 0.74
USP39-201ENST00000323701 RNF216Q9NWF9 866 aaPredicted RBP19.64■□□□□ 0.74
USP39-201ENST00000323701 PARP2Q9UGN5 583 aa19.64■□□□□ 0.74
USP39-201ENST00000323701 GTF3C4Q9UKN8 822 aa19.64■□□□□ 0.74
USP39-201ENST00000323701 KCNK3O14649 394 aa19.64■□□□□ 0.73
USP39-201ENST00000323701 FKTNO75072 461 aa19.64■□□□□ 0.73
USP39-201ENST00000323701 RPS6KA5O75582 802 aa19.64■□□□□ 0.73
USP39-201ENST00000323701 AFF1P51825 1210 aaKnown RBP19.64■□□□□ 0.73
USP39-201ENST00000323701 HADHBP55084 474 aaKnown RBP19.64■□□□□ 0.73
USP39-201ENST00000323701 RBP5P82980 135 aa19.64■□□□□ 0.73
USP39-201ENST00000323701 TCEAL1Q15170 157 aa19.64■□□□□ 0.73
USP39-201ENST00000323701 CD302Q8IX05 232 aa19.64■□□□□ 0.73
USP39-201ENST00000323701 WDTC1Q8N5D0 677 aa19.64■□□□□ 0.73
USP39-201ENST00000323701 CAGE1Q8TC20 777 aa19.64■□□□□ 0.73
USP39-201ENST00000323701 CNOT8Q9UFF9 292 aaKnown RBP19.64■□□□□ 0.73
USP39-201ENST00000323701 RHOXF2BP0C7M4 288 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 IGFBP6P24592 240 aaPredicted RBP19.63■□□□□ 0.73
USP39-201ENST00000323701 ATICP31939 592 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 PTP4A2Q12974 167 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 RNF180Q86T96 592 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 PCSK9Q8NBP7 692 aaKnown RBP19.63■□□□□ 0.73
USP39-201ENST00000323701 SLC4A11Q8NBS3 891 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 RABGGTAQ92696 567 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 HES6Q96HZ4 224 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 ZFP42Q96MM3 310 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 RHOXF2Q9BQY4 288 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 C11orf70Q9BRQ4 267 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 ALG6Q9Y672 507 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 PTCH2Q9Y6C5 1203 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 TMEM110-MUSTN1A8MSY1 372 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 M0QZ92 97 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 DCAF12L1Q5VU92 463 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 APBB1IPQ7Z5R6 666 aaPredicted RBP19.63■□□□□ 0.73
USP39-201ENST00000323701 NT5DC4Q86YG4 428 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 ZNF564Q8TBZ8 553 aaPredicted RBP19.63■□□□□ 0.73
USP39-201ENST00000323701 PNKPQ96T60 521 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 NME7Q9Y5B8 376 aa19.63■□□□□ 0.73
USP39-201ENST00000323701 CILPO75339 1184 aa19.62■□□□□ 0.73
USP39-201ENST00000323701 MTA2O94776 668 aa19.62■□□□□ 0.73
USP39-201ENST00000323701 GJB6O95452 261 aa19.62■□□□□ 0.73
USP39-201ENST00000323701 NSFP46459 744 aaKnown RBP19.62■□□□□ 0.73
USP39-201ENST00000323701 MESDQ14696 234 aa19.62■□□□□ 0.73
USP39-201ENST00000323701 XKR4Q5GH76 650 aa19.62■□□□□ 0.73
USP39-201ENST00000323701 MMS22LQ6ZRQ5 1243 aa19.62■□□□□ 0.73
USP39-201ENST00000323701 RPAINQ86UA6 219 aa19.62■□□□□ 0.73
USP39-201ENST00000323701 RSPH3Q86UC2 560 aa19.62■□□□□ 0.73
USP39-201ENST00000323701 SH3TC2Q8TF17 1288 aa19.62■□□□□ 0.73
USP39-201ENST00000323701 DERAQ9Y315 318 aa19.62■□□□□ 0.73
USP39-201ENST00000323701 PDCD11Q14690 1871 aaKnown RBP19.62■□□□□ 0.73
USP39-201ENST00000323701 DDX3YO15523 660 aaKnown RBP19.61■□□□□ 0.73
USP39-201ENST00000323701 MGEA5O60502 916 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 MARCKSL1P49006 195 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 MRPS25P82663 173 aaKnown RBP19.61■□□□□ 0.73
USP39-201ENST00000323701 TRIM71Q2Q1W2 868 aaKnown RBP19.61■□□□□ 0.73
USP39-201ENST00000323701 C9orf57Q5W0N0 161 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 C1orf131Q8NDD1 294 aaKnown RBP19.61■□□□□ 0.73
USP39-201ENST00000323701 PARD6BQ9BYG5 372 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 TRPV6Q9H1D0 765 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 CACNG4Q9UBN1 327 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 PTGESO14684 152 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 SPTLC1O15269 473 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 GHRP10912 638 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 H2AFXP16104 143 aaPredicted RBP19.61■□□□□ 0.73
USP39-201ENST00000323701 CD52P31358 61 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 GRK4P32298 578 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 DENND1BQ6P3S1 775 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 ZNF572Q7Z3I7 529 aaPredicted RBP19.61■□□□□ 0.73
USP39-201ENST00000323701 SYCE1Q8N0S2 351 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 GPR161Q8N6U8 529 aaKnown RBP19.61■□□□□ 0.73
USP39-201ENST00000323701 SPATA4Q8NEY3 305 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 ALG3Q92685 438 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 KRT35Q92764 455 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 LPPQ93052 612 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 CYTH4Q9UIA0 394 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 AMFRQ9UKV5 643 aa19.61■□□□□ 0.73
USP39-201ENST00000323701 MYCP01106 439 aaPredicted RBP19.6■□□□□ 0.73
USP39-201ENST00000323701 GNRH1P01148 92 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 CD19P15391 556 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 CKAP4Q07065 602 aaKnown RBP19.6■□□□□ 0.73
USP39-201ENST00000323701 GSTCDQ8NEC7 633 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 RBM12Q9NTZ6 932 aaKnown RBP19.6■□□□□ 0.73
USP39-201ENST00000323701 ADAM22Q9P0K1 906 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 PADI3Q9ULW8 664 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 SNX9Q9Y5X1 595 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 HCRTO43612 131 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 STAU1O95793 577 aaKnown RBP19.6■□□□□ 0.73
USP39-201ENST00000323701 COMTP21964 271 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 NDST1P52848 882 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 FBXO47Q5MNV8 452 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 C11orf63Q6NUN7 778 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 PHF13Q86YI8 300 aaPredicted RBP19.6■□□□□ 0.73
USP39-201ENST00000323701 HINFPQ9BQA5 517 aa19.6■□□□□ 0.73
USP39-201ENST00000323701 MRPL45Q9BRJ2 306 aaKnown RBP19.6■□□□□ 0.73
USP39-201ENST00000323701 HMX1Q9NP08 348 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms