RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 COL1A2P08123 1366 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 KAT6AQ92794 2004 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 A6NHS1 94 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 H2AFZP0C0S5 128 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 NR1D1P20393 614 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 ELF3P78545 371 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-201ENST00000317677 TSHZ1Q6ZSZ6 1077 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 H2AFVQ71UI9 128 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 USP37Q86T82 979 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 SLC47A2Q86VL8 602 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 GSPT2Q8IYD1 628 aaKnown RBP13.91□□□□□ -0.18
CPNE1-201ENST00000317677 LRRC57Q8N9N7 239 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 TSEN2Q8NCE0 465 aaKnown RBP13.91□□□□□ -0.18
CPNE1-201ENST00000317677 VTI1AQ96AJ9 217 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 ARHGEF26Q96DR7 871 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 FNBP1Q96RU3 617 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 GOLPH3Q9H4A6 298 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 CPSF3Q9UKF6 684 aaKnown RBP13.91□□□□□ -0.18
CPNE1-201ENST00000317677 GJD2Q9UKL4 321 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 UMODL1Q5DID0 1318 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 A0A087WZ62 844 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 GMNCA6NCL1 334 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 CAND2O75155 1236 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 FTCDO95954 541 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 VTNP04004 478 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 MFAP3P55082 362 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 GUCY1A3Q02108 690 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 TNFAIP2Q03169 654 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 ACCSLQ4AC99 568 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 MPZL3Q6UWV2 235 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 VPS36Q86VN1 386 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 CREG2Q8IUH2 290 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 TMEM192Q8IY95 271 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 RPUSD2Q8IZ73 545 aaKnown RBP13.91□□□□□ -0.18
CPNE1-201ENST00000317677 THOC1Q96FV9 657 aaKnown RBP13.91□□□□□ -0.18
CPNE1-201ENST00000317677 ZIM3Q96PE6 472 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 ALS2CR12Q96Q35 445 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 FDXACB1Q9BRP7 624 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-201ENST00000317677 NFKBIZQ9BYH8 718 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 EHD2Q9NZN4 543 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 INTUQ9ULD6 942 aa13.91□□□□□ -0.18
CPNE1-201ENST00000317677 NCANO14594 1321 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 INO80B-WBP1J3KQ70 363 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 OGTO15294 1046 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 ASAP2O43150 1006 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 DYNC1LI2O43237 492 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-201ENST00000317677 CYP2B6P20813 491 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 TNFAIP3P21580 790 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 ATP1A2P50993 1020 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 FMO1Q01740 532 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 TFDP1Q14186 410 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 HIC1Q14526 733 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 GRIK4Q16099 956 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 ATF7IP2Q5U623 682 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 CWF19L1Q69YN2 538 aaKnown RBP13.9□□□□□ -0.18
CPNE1-201ENST00000317677 IFNLR1Q8IU57 520 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-201ENST00000317677 KIRREL3Q8IZU9 778 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 TMEM130Q8N3G9 435 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 ZFAND2BQ8WV99 257 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 DDX1Q92499 740 aaKnown RBP13.9□□□□□ -0.18
CPNE1-201ENST00000317677 ANKRD27Q96NW4 1050 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 PSMB7Q99436 277 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 INO80BQ9C086 356 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-201ENST00000317677 CDT1Q9H211 546 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 SMARCAL1Q9NZC9 954 aa13.9□□□□□ -0.18
CPNE1-201ENST00000317677 PACSIN2Q9UNF0 486 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-201ENST00000317677 A6NJR5 290 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 MAGEB2O15479 319 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 ZC3H11AO75152 810 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPNE1-201ENST00000317677 GSTA1P08263 222 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 CXCR5P32302 372 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 PIK3CAP42336 1068 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 SEC24CP53992 1094 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 GCNT1Q02742 428 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 BLMHQ13867 455 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 MEI1Q5TIA1 1274 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 SLC30A9Q6PML9 568 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 TPCN2Q8NHX9 752 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 ATP6V1G3Q96LB4 118 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 TCHPQ9BT92 498 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 A0A0A6YYK5 440 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-201ENST00000317677 TRAPPC3O43617 180 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 BUB1BO60566 1050 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-201ENST00000317677 CST3P01034 146 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-201ENST00000317677 MMEP08473 750 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 TMEM253P0C7T8 217 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 CYP11B1P15538 503 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 ACO1P21399 889 aaKnown RBP13.89□□□□□ -0.19
CPNE1-201ENST00000317677 ROR2Q01974 943 aaKnown RBP13.89□□□□□ -0.19
CPNE1-201ENST00000317677 POU5F1BQ06416 359 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 BIRC3Q13489 604 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 DGKDQ16760 1214 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 FAM187BQ17R55 369 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 ZNF568Q3ZCX4 644 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 KIAA0319LQ8IZA0 1049 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 CCT6BQ92526 530 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 THAP2Q9H0W7 228 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 ISCUQ9H1K1 167 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 OSGEPQ9NPF4 335 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 SLC5A4Q9NY91 659 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms