RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PEX5P50542 639 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 POLGP54098 1239 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 NCKAP1LP55160 1127 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 FAM84AQ96KN4 292 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 YIPF3Q9GZM5 350 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 AAASQ9NRG9 546 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 SPATS2LQ9NUQ6 558 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 DGAT1O75907 488 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 ADORA2AP29274 412 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 ATP5DP30049 168 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 STAT5BP51692 787 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 MYL7Q01449 175 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 PHLDB3Q6NSJ2 640 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 SLC13A5Q86YT5 568 aaPredicted RBP18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 ANKLE1Q8NAG6 615 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 ATMINO43313 823 aaPredicted RBP18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 ECEL1O95672 775 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 CHKAP35790 457 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 HADHBP55084 474 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 KIF22Q14807 665 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 EMC2Q15006 297 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 SPRYD7Q5W111 196 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 TRIM68Q6AZZ1 485 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 ELMO3Q96BJ8 720 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 TMEM206Q9H813 350 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 HSPBP1Q9NZL4 362 aa18.23■□□□□ 0.51
SCAMP4-201ENST00000316097 TXNP10599 105 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 CCNB1P14635 433 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 CYP1B1Q16678 543 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 C11orf91Q3C1V1 193 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 ZNF568Q3ZCX4 644 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 ECHDC2Q86YB7 292 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 ZNF668Q96K58 619 aaPredicted RBP18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 TBK1Q9UHD2 729 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 UNC5CO95185 931 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 LUC7L3O95232 432 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 CNGA1P29973 690 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 GPC5P78333 572 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 METTL7BQ6UX53 244 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 SLC17A8Q8NDX2 589 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 PLEKHO2Q8TD55 490 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 SEPT1Q8WYJ6 367 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 UTP4Q969X6 686 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 NAF1Q96HR8 494 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 BTBD6Q96KE9 485 aa18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 NKX1-2Q9UD57 310 aaPredicted RBP18.22■□□□□ 0.51
SCAMP4-201ENST00000316097 UBE4BO95155 1302 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 MCM3APO60318 1980 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 IGKV6D-21A0A0A0MT36 114 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 LIN7AO14910 233 aaPredicted RBP18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 SPOPO43791 374 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 UPP2O95045 317 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 DLATP10515 647 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 SIX1Q15475 284 aaPredicted RBP18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 SLC39A4Q6P5W5 647 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 FAM47EQ6ZV65 393 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 ARMCX2Q7L311 632 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 TAS1R3Q7RTX0 852 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 CBWD2Q8IUF1 395 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 ASAP3Q8TDY4 903 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 FBF1Q8TES7 1133 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 TRAPPC12Q8WVT3 735 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 SPATA33Q96N06 139 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 OSBPL1AQ9BXW6 950 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 MAF1Q9H063 256 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 ASIC3Q9UHC3 531 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 NOP56O00567 594 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 DKC1O60832 514 aaKnown RBP eCLIP18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 TGFB3P10600 412 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 CCNG1P51959 295 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 HUNKP57058 714 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 SARNPP82979 210 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 KRT17Q04695 432 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 KYNUQ16719 465 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 RNF43Q68DV7 783 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 RPUSD2Q8IZ73 545 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 KIFAP3Q92845 792 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 RAB3IPQ96QF0 476 aaPredicted RBP18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 RPS6KC1Q96S38 1066 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 GPR20Q99678 358 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 WNT8AQ9H1J5 351 aa18.21■□□□□ 0.51
SCAMP4-201ENST00000316097 WDR81Q562E7 1941 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 TP73O15350 636 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 LINGO3P0C6S8 592 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 MAPTP10636 758 aaKnown RBP18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 SKIV2L2P42285 1042 aaKnown RBP18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 SNX1Q13596 522 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 CELF3Q5SZQ8 465 aaKnown RBP18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 CYP4X1Q8N118 509 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 C1orf54Q8WWF1 131 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 CCDC127Q96BQ5 260 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 WFS1O76024 890 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 ADRB2P07550 413 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 GCLMP48507 274 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 PPP3CAQ08209 521 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 BFSP1Q12934 665 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 NFIL3Q16649 462 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 INTS8Q75QN2 995 aaKnown RBP18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 SRRM1Q8IYB3 904 aaKnown RBP18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 MAGEB18Q96M61 343 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms