RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 CA8P35219 290 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 NOP14P78316 857 aaKnown RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 PTPN14Q15678 1187 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 PTPROQ16827 1216 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 VARS2Q5ST30 1063 aaKnown RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 WSCD1Q658N2 575 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 GUCD1Q96NT3 240 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 CDX2Q99626 313 aaPredicted RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 CRACR2AQ9BSW2 395 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 IMPG2Q9BZV3 1241 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 MRPL17Q9NRX2 175 aaKnown RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 L1RE1Q9UN81 338 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 TRANK1O15050 2925 aa13.83□□□□□ -0.19
APTX-201ENST00000309615 LRRC10BA6NIK2 292 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 GOLGA6L19H0YKK7 550 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 LILRB3O75022 631 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 IGFBP4P22692 258 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 COPB1P53618 953 aaKnown RBP13.83□□□□□ -0.2
APTX-201ENST00000309615 TNNC1P63316 161 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 CETN1Q12798 172 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 SMC1AQ14683 1233 aaKnown RBP13.83□□□□□ -0.2
APTX-201ENST00000309615 SOWAHAQ2M3V2 549 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 ZNF667Q5HYK9 610 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 PDCL2Q8N4E4 241 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 MRPL43Q8N983 215 aaKnown RBP13.83□□□□□ -0.2
APTX-201ENST00000309615 APPL2Q8NEU8 664 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 ANKRD20A12PQ8NF67 263 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 LMO3Q8TAP4 145 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 LNX1Q8TBB1 728 aaPredicted RBP13.83□□□□□ -0.2
APTX-201ENST00000309615 TAF4BQ92750 862 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 MMS19Q96T76 1030 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 NGRNQ9NPE2 291 aaKnown RBP13.83□□□□□ -0.2
APTX-201ENST00000309615 MTMR10Q9NXD2 777 aa13.83□□□□□ -0.2
APTX-201ENST00000309615 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.82□□□□□ -0.2
APTX-201ENST00000309615 C2orf71A6NGG8 1288 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 HUS1O60921 280 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 CYP11A1P05108 521 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 RPL17P18621 184 aaKnown RBP13.82□□□□□ -0.2
APTX-201ENST00000309615 TYMPP19971 482 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 YWHAHQ04917 246 aaPredicted RBP13.82□□□□□ -0.2
APTX-201ENST00000309615 BMS1Q14692 1282 aaKnown RBP13.82□□□□□ -0.2
APTX-201ENST00000309615 SCARA5Q6ZMJ2 495 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 LIMS2Q7Z4I7 341 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 GAS2L3Q86XJ1 694 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 TOP6BLQ8N6T0 577 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 CCDC150Q8NCX0 1101 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 MYLIPQ8WY64 445 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 PIK3R5Q8WYR1 880 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 TATDN2Q93075 761 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 GCNT4Q9P109 453 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 IRAK3Q9Y616 596 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 MTCH2Q9Y6C9 303 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 VWA8A3KMH1 1905 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 MYO9BQ13459 2157 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 OAZ2O95190 189 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 TPM2P07951 284 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 ASPAP45381 313 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 CDH8P55286 799 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 TPM4P67936 248 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 LRMPQ12912 555 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 MRPL58Q14197 206 aaKnown RBP13.82□□□□□ -0.2
APTX-201ENST00000309615 PSMD5Q16401 504 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 WDR44Q5JSH3 913 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 OVOS1Q6IE37 1185 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 PDE12Q6L8Q7 609 aaKnown RBP13.82□□□□□ -0.2
APTX-201ENST00000309615 ANKS3Q6ZW76 656 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 ADGRD2Q7Z7M1 963 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 EHBP1Q8NDI1 1231 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 GAS2L1Q99501 681 aaPredicted RBP13.82□□□□□ -0.2
APTX-201ENST00000309615 INTS2Q9H0H0 1204 aaKnown RBP13.82□□□□□ -0.2
APTX-201ENST00000309615 SMYD3Q9H7B4 428 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 DSEQ9UL01 958 aa13.82□□□□□ -0.2
APTX-201ENST00000309615 ARHGEF37A1IGU5 675 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 ADAM12O43184 909 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 CNPP09543 421 aaKnown RBP13.81□□□□□ -0.2
APTX-201ENST00000309615 SLC9A1P19634 815 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 POU3F3P20264 500 aaPredicted RBP13.81□□□□□ -0.2
APTX-201ENST00000309615 RAP1GAPP47736 663 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 APBA1Q02410 837 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 EXOC3L4Q17RC7 722 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 RSPO2Q6UXX9 243 aaPredicted RBP13.81□□□□□ -0.2
APTX-201ENST00000309615 DPH6Q7L8W6 267 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 METTL23Q86XA0 190 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 GLYCTKQ8IVS8 523 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 ADGRF2Q8IZF7 708 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 KBTBD7Q8WVZ9 684 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 MRPL45Q9BRJ2 306 aaKnown RBP13.81□□□□□ -0.2
APTX-201ENST00000309615 ANP32EQ9BTT0 268 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 NIF3L1Q9GZT8 377 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 SDCBP2Q9H190 292 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 LMCD1Q9NZU5 365 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 SSX2IPQ9Y2D8 614 aa13.81□□□□□ -0.2
APTX-201ENST00000309615 GTPBP10A4D1E9 387 aaKnown RBP13.8□□□□□ -0.2
APTX-201ENST00000309615 LGALS16A8MUM7 142 aa13.8□□□□□ -0.2
APTX-201ENST00000309615 TEX28O15482 410 aa13.8□□□□□ -0.2
APTX-201ENST00000309615 HCRTO43612 131 aa13.8□□□□□ -0.2
APTX-201ENST00000309615 WEE2P0C1S8 567 aa13.8□□□□□ -0.2
APTX-201ENST00000309615 P4HA1P13674 534 aa13.8□□□□□ -0.2
APTX-201ENST00000309615 PON1P27169 355 aa13.8□□□□□ -0.2
APTX-201ENST00000309615 CTXN3Q4LDR2 81 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms