RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 CENPCQ03188 943 aa23.93■■□□□ 1.42
PDLIM2-202ENST00000308354 IFT20Q8IY31 132 aa23.93■■□□□ 1.42
PDLIM2-202ENST00000308354 APOL6Q9BWW8 343 aa23.93■■□□□ 1.42
PDLIM2-202ENST00000308354 SDCBP2Q9H190 292 aa23.93■■□□□ 1.42
PDLIM2-202ENST00000308354 SMYD3Q9H7B4 428 aa23.93■■□□□ 1.42
PDLIM2-202ENST00000308354 AGAP1Q9UPQ3 857 aa23.93■■□□□ 1.42
PDLIM2-202ENST00000308354 ALDH1A1P00352 501 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 ELNP15502 786 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 MARCKSL1P49006 195 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 EPHB4P54760 987 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 CACNB2Q08289 660 aaPredicted RBP23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 ZNF211Q13398 564 aaPredicted RBP23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 NOTUMQ6P988 496 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 ALG3Q92685 438 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 KRT35Q92764 455 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 NXF3Q9H4D5 531 aaKnown RBP23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 PIN4Q9Y237 131 aaKnown RBP23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 MTA2O94776 668 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 CARSP49589 748 aaKnown RBP23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 GJA9P57773 515 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 NOGQ13253 232 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 KYAT1Q16773 422 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 DCAF4L1Q3SXM0 396 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 HSP90B2PQ58FF3 399 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 C11orf63Q6NUN7 778 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 TFAP2BQ92481 460 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 CALR3Q96L12 384 aaKnown RBP23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 DPP3Q9NY33 737 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 VPS18Q9P253 973 aa23.92■■□□□ 1.42
PDLIM2-202ENST00000308354 KRIT1O00522 736 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 ITGA4P13612 1032 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 AKAP5P24588 427 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 AARSP49588 968 aaKnown RBP eCLIP23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 KCTD19Q17RG1 926 aaPredicted RBP23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 GLRA4Q5JXX5 417 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 MON1BQ7L1V2 547 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 IFT81Q8WYA0 676 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 ZMAT2Q96NC0 199 aaKnown RBP23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 TRIM6Q9C030 488 aaPredicted RBP23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 RNF186Q9NXI6 227 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 NBPF20Q3BBV1 942 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 MMS22LQ6ZRQ5 1243 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 ZNF771Q7L3S4 317 aaPredicted RBP23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 HPDLQ96IR7 371 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 DDX47Q9H0S4 455 aaKnown RBP23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 ADAM22Q9P0K1 906 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 UVRAGQ9P2Y5 699 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 HMGXB4Q9UGU5 601 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 NFU1Q9UMS0 254 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 FAN1Q9Y2M0 1017 aa23.91■■□□□ 1.42
PDLIM2-202ENST00000308354 CCND3P30281 292 aaPredicted RBP23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 TRADDQ15628 312 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 AADACL2Q6P093 401 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 EMBQ6PCB8 327 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 CASKIN2Q8WXE0 1202 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 CAPNS2Q96L46 248 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 MED4Q9NPJ6 270 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 ANAPC7Q9UJX3 599 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 C2CD2Q9Y426 696 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 FGGP02679 453 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 POU5F1Q01860 360 aaKnown RBP23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 FAM47CQ5HY64 1035 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 FAM71BQ8TC56 605 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 MTG1Q9BT17 334 aaPredicted RBP23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 BCO2Q9BYV7 579 aa23.9■■□□□ 1.42
PDLIM2-202ENST00000308354 SART1O43290 800 aaKnown RBP23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 GJB6O95452 261 aa23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 SYF2O95926 243 aaKnown RBP23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 RARBP10826 455 aa23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 GNAT1P11488 350 aa23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 CD19P15391 556 aa23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 HOXC8P31273 242 aa23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 TRIM72Q6ZMU5 477 aa23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 ADAT2Q7Z6V5 191 aaKnown RBP23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 C1orf131Q8NDD1 294 aaKnown RBP23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 RIN2Q8WYP3 895 aaPredicted RBP23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 TWNKQ96RR1 684 aa23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 CITO14578 2027 aa23.89■■□□□ 1.41
PDLIM2-202ENST00000308354 SEPT4O43236 478 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 SPOPO43791 374 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 SP3Q02447 781 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 DEFB115Q30KQ5 88 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 RNPC3Q96LT9 517 aaKnown RBP23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 CARD9Q9H257 536 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 KLK14Q9P0G3 267 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 TRIP11Q15643 1979 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 GGCXP38435 758 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 FAM193AP78312 1265 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 GDF6Q6KF10 455 aaPredicted RBP23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 CAVIN3Q969G5 261 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 C18orf25Q96B23 403 aaPredicted RBP23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 SNX27Q96L92 541 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 RNF39Q9H2S5 420 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 TUBGCP4Q9UGJ1 667 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 ADAM21Q9UKJ8 722 aa23.88■■□□□ 1.41
PDLIM2-202ENST00000308354 CCDC188H7C350 402 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 AGPSO00116 658 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 PPEF2O14830 753 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 RECQL4O94761 1208 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 TOMM70O94826 608 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms