RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 DNAI1Q9UI46 699 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 GUCA1BQ9UMX6 200 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 PCDHB4Q9Y5E5 795 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TRIP11Q15643 1979 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 PIRO00625 290 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ITGA4P13612 1032 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CSF2RAP15509 400 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 FMO1Q01740 532 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 MYO1EQ12965 1108 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TCEAL1Q15170 157 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 WDR72Q3MJ13 1102 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ZNF569Q5MCW4 686 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CNKSR3Q6P9H4 555 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TMEM270Q6UE05 265 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 DEFB128Q7Z7B8 93 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 GSTCDQ8NEC7 633 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 LPPQ93052 612 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 WDR24Q96S15 920 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 APOL6Q9BWW8 343 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 UBN1Q9NPG3 1134 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CISHQ9NSE2 258 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TRIM10Q9UDY6 481 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 DUSP10Q9Y6W6 482 aa13.71□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 PDCD11Q14690 1871 aaKnown RBP13.71□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 LTBP2Q14767 1821 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PTGESO14684 152 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 INPPL1O15357 1258 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 RTN2O75298 545 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TMEM253P0C7T8 217 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 LRPAP1P30533 357 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CASQ1P31415 396 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 C9orf57Q5W0N0 161 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TRIM72Q6ZMU5 477 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 C7orf61Q8IZ16 206 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TMEM199Q8N511 208 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 RBBP8NLQ8NC74 664 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SECISBP2LQ93073 1101 aaKnown RBP13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CALR3Q96L12 384 aaKnown RBP13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PPP1R10Q96QC0 940 aaKnown RBP13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PCDHB18PQ96TA0 734 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 HTATIP2Q9BUP3 242 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ELAC1Q9H777 363 aaKnown RBP13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 RNF19AQ9NV58 838 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SLC38A7Q9NVC3 462 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 KLK14Q9P0G3 267 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TFR2Q9UP52 801 aa13.7□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ANKRD62A6NC57 917 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 FANCGO15287 622 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 EOMESO95936 686 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PFKMP08237 780 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 MMEP08473 750 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PAEPP09466 180 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 FAM163BP0C2L3 166 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PNPLA4P41247 253 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 AFF1P51825 1210 aaKnown RBP13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 GUCY2FP51841 1108 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 GALCP54803 685 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 INCA1Q0VD86 236 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TUBB2AQ13885 445 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PPP1R2P3Q6NXS1 205 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SLC35F6Q8N357 371 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TRIM58Q8NG06 486 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 C18orf25Q96B23 403 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PGBD4Q96DM1 585 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ZFP42Q96MM3 310 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TUBB2BQ9BVA1 445 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TMEM161AQ9NX61 479 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 GDAP2Q9NXN4 497 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 NXF1Q9UBU9 619 aaKnown RBP13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 MICAL3Q7RTP6 2002 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TACC1O75410 805 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 WEE2P0C1S8 567 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 MLH1P40692 756 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TERF1P54274 439 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 C16orf59Q7L2K0 433 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 LIMS2Q7Z4I7 341 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TMEM130Q8N3G9 435 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ZNF592Q92610 1267 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 NOX5Q96PH1 765 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 GAD1Q99259 594 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PACSIN1Q9BY11 444 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 L2HGDHQ9H9P8 463 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 RSAD1Q9HA92 442 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 IL23AQ9NPF7 189 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ACP6Q9NPH0 428 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 MIOSQ9NXC5 875 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TUBGCP4Q9UGJ1 667 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SALL4Q9UJQ4 1053 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 POLIQ9UNA4 740 aa13.69□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ABHD14A-ACY1A0A1B0GW23 586 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ARL5CA6NH57 179 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CILPO75339 1184 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 FTLP02792 175 aaPredicted RBP13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CYP1A1P04798 512 aaPredicted RBP13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 UNGP13051 313 aaPredicted RBP13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 GNA15P30679 374 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 IFI16Q16666 785 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms