RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 KLHL23Q8NBE8 558 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 KREMEN1Q96MU8 473 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 BCO2Q9BYV7 579 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 TIMM13Q9Y5L4 95 aaPredicted RBP29.08■■■□□ 2.25
HDAC3-201ENST00000305264 CARNS1A5YM72 827 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 FGF18O76093 207 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 P4HA1P13674 534 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 DNAJB2P25686 324 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 GCNT1Q02742 428 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 RWDD3Q9Y3V2 267 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 ITIH6Q6UXX5 1313 aa29.07■■■□□ 2.24
HDAC3-201ENST00000305264 WEE2P0C1S8 567 aa29.07■■■□□ 2.24
HDAC3-201ENST00000305264 TRIM21P19474 475 aaKnown RBP29.07■■■□□ 2.24
HDAC3-201ENST00000305264 PAX3P23760 479 aa29.07■■■□□ 2.24
HDAC3-201ENST00000305264 CDH8P55286 799 aa29.07■■■□□ 2.24
HDAC3-201ENST00000305264 SMAD3P84022 425 aaKnown RBP29.07■■■□□ 2.24
HDAC3-201ENST00000305264 PRPF38BQ5VTL8 546 aaKnown RBP29.07■■■□□ 2.24
HDAC3-201ENST00000305264 SPECC1LQ69YQ0 1117 aa29.07■■■□□ 2.24
HDAC3-201ENST00000305264 LIMS2Q7Z4I7 341 aa29.07■■■□□ 2.24
HDAC3-201ENST00000305264 B3GALT6Q96L58 329 aa29.07■■■□□ 2.24
HDAC3-201ENST00000305264 DNAJC12Q9UKB3 198 aa29.07■■■□□ 2.24
HDAC3-201ENST00000305264 A0A1W2PPC1 479 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 TRAPPC3O43617 180 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 HUS1O60921 280 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 ODC1P11926 461 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 TKTP29401 623 aaKnown RBP29.06■■■□□ 2.24
HDAC3-201ENST00000305264 POLR2FP61218 127 aaKnown RBP29.06■■■□□ 2.24
HDAC3-201ENST00000305264 FAM171A1Q5VUB5 890 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 PPP2R2DQ66LE6 453 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 TAS1R1Q7RTX1 841 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 RNF168Q8IYW5 571 aaPredicted RBP29.06■■■□□ 2.24
HDAC3-201ENST00000305264 PDCL2Q8N4E4 241 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 TOP6BLQ8N6T0 577 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 APPL2Q8NEU8 664 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 TGS1Q96RS0 853 aaKnown RBP29.06■■■□□ 2.24
HDAC3-201ENST00000305264 NAA15Q9BXJ9 866 aaKnown RBP29.06■■■□□ 2.24
HDAC3-201ENST00000305264 TTYH3Q9C0H2 523 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 TBXAS1P24557 533 aaPredicted RBP29.06■■■□□ 2.24
HDAC3-201ENST00000305264 WSCD1Q658N2 575 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 KBTBD7Q8WVZ9 684 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 MRPL45Q9BRJ2 306 aaKnown RBP29.06■■■□□ 2.24
HDAC3-201ENST00000305264 PCDHB8Q9UN66 801 aa29.06■■■□□ 2.24
HDAC3-201ENST00000305264 TMC6Q7Z403 805 aa29.05■■■□□ 2.24
HDAC3-201ENST00000305264 FAXDC2Q96IV6 333 aa29.05■■■□□ 2.24
HDAC3-201ENST00000305264 PLVAPQ9BX97 442 aa29.05■■■□□ 2.24
HDAC3-201ENST00000305264 NLRC4Q9NPP4 1024 aa29.05■■■□□ 2.24
HDAC3-201ENST00000305264 C5orf67F2Z3F1 127 aa29.04■■■□□ 2.24
HDAC3-201ENST00000305264 CD58P19256 250 aa29.04■■■□□ 2.24
HDAC3-201ENST00000305264 ERVK-21P61565 698 aa29.04■■■□□ 2.24
HDAC3-201ENST00000305264 ELAVL2Q12926 359 aaKnown RBP29.04■■■□□ 2.24
HDAC3-201ENST00000305264 RAPGEF1Q13905 1077 aa29.04■■■□□ 2.24
HDAC3-201ENST00000305264 ARHGAP44Q17R89 818 aa29.04■■■□□ 2.24
HDAC3-201ENST00000305264 ADGRF2Q8IZF7 708 aa29.04■■■□□ 2.24
HDAC3-201ENST00000305264 CERS4Q9HA82 394 aa29.04■■■□□ 2.24
HDAC3-201ENST00000305264 FBXL5Q9UKA1 691 aa29.04■■■□□ 2.24
HDAC3-201ENST00000305264 PLCB3Q01970 1234 aa29.04■■■□□ 2.24
HDAC3-201ENST00000305264 TIFAQ96CG3 184 aa29.04■■■□□ 2.24
HDAC3-201ENST00000305264 SLC28A3Q9HAS3 691 aa29.04■■■□□ 2.24
HDAC3-201ENST00000305264 GYPCP04921 128 aa29.03■■■□□ 2.24
HDAC3-201ENST00000305264 FGFR3P22607 806 aa29.03■■■□□ 2.24
HDAC3-201ENST00000305264 RFX1P22670 979 aa29.03■■■□□ 2.24
HDAC3-201ENST00000305264 MFAP3P55082 362 aa29.03■■■□□ 2.24
HDAC3-201ENST00000305264 LRIT3Q3SXY7 679 aa29.03■■■□□ 2.24
HDAC3-201ENST00000305264 DDX53Q86TM3 631 aaKnown RBP29.03■■■□□ 2.24
HDAC3-201ENST00000305264 CEP57Q86XR8 500 aa29.03■■■□□ 2.24
HDAC3-201ENST00000305264 UBR7Q8N806 425 aa29.03■■■□□ 2.24
HDAC3-201ENST00000305264 CYP3A43Q9HB55 503 aa29.03■■■□□ 2.24
HDAC3-201ENST00000305264 ALG13Q9NP73 1137 aaKnown RBP29.03■■■□□ 2.24
HDAC3-201ENST00000305264 CISHQ9NSE2 258 aa29.03■■■□□ 2.24
HDAC3-201ENST00000305264 CEP72Q9P209 647 aa29.03■■■□□ 2.24
HDAC3-201ENST00000305264 CYP11A1P05108 521 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 RTP2Q5QGT7 225 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.02■■■□□ 2.24
HDAC3-201ENST00000305264 DPH6Q7L8W6 267 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 OSTM1Q86WC4 334 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 SAMD11Q96NU1 681 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 GPR88Q9GZN0 384 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 HMGXB4Q9UGU5 601 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 NME7Q9Y5B8 376 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 TRANK1O15050 2925 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 RNF225M0QZC1 329 aaPredicted RBP29.02■■■□□ 2.24
HDAC3-201ENST00000305264 SYN3O14994 580 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 HCRTO43612 131 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 TACC1O75410 805 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 SOD2P04179 222 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 PNMA6AP0CW24 399 aaPredicted RBP29.02■■■□□ 2.24
HDAC3-201ENST00000305264 TYMPP19971 482 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 ACO1P21399 889 aaKnown RBP29.02■■■□□ 2.24
HDAC3-201ENST00000305264 CDC25BP30305 580 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 FIGNQ5HY92 759 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 ENOSF1Q7L5Y1 443 aa29.02■■■□□ 2.24
HDAC3-201ENST00000305264 KRT17Q04695 432 aa29.01■■■□□ 2.23
HDAC3-201ENST00000305264 TMEM86AQ8N2M4 240 aa29.01■■■□□ 2.23
HDAC3-201ENST00000305264 NUP58Q9BVL2 599 aa29.01■■■□□ 2.23
HDAC3-201ENST00000305264 HERC2P3Q9BVR0 1158 aa29.01■■■□□ 2.23
HDAC3-201ENST00000305264 DSEQ9UL01 958 aa29.01■■■□□ 2.23
HDAC3-201ENST00000305264 INCA1Q0VD86 236 aa29.01■■■□□ 2.23
HDAC3-201ENST00000305264 DRAP1Q14919 205 aaPredicted RBP29.01■■■□□ 2.23
HDAC3-201ENST00000305264 CACNA2D4Q7Z3S7 1137 aa29.01■■■□□ 2.23
HDAC3-201ENST00000305264 VPS52Q8N1B4 723 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms