RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 HS2ST1Q7LGA3 356 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 GRAMD1CQ8IYS0 662 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 ITFG1Q8TB96 612 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 SCFD1Q8WVM8 642 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 RSAD2Q8WXG1 361 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 PAGE5Q96GU1 130 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 CHAMP1Q96JM3 812 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 PDE11AQ9HCR9 933 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 AGPAT3Q9NRZ7 376 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 ITGA11Q9UKX5 1188 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 HPSEQ9Y251 543 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 KPNA7A9QM74 516 aa28.53■■■□□ 2.16
CDKN2A-201ENST00000304494 ITGB3P05106 788 aa28.53■■■□□ 2.16
CDKN2A-201ENST00000304494 SLC44A3Q8N4M1 653 aa28.53■■■□□ 2.16
CDKN2A-201ENST00000304494 SLC39A2Q9NP94 309 aa28.53■■■□□ 2.16
CDKN2A-201ENST00000304494 CGNQ9P2M7 1197 aaKnown RBP28.53■■■□□ 2.16
CDKN2A-201ENST00000304494 MRPS23Q9Y3D9 190 aaKnown RBP28.53■■■□□ 2.16
CDKN2A-201ENST00000304494 MYO10Q9HD67 2058 aa28.53■■■□□ 2.16
CDKN2A-201ENST00000304494 TGFB1I1O43294 461 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 OR4Q2P0C623 313 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 TMEM191BP0C7N4 346 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 POLR2BP30876 1174 aaKnown RBP28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 SYKP43405 635 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 TWF1Q12792 350 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 PLD1Q13393 1074 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 HTR4Q13639 388 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 BMT2Q1RMZ1 405 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 IQCEQ6IPM2 695 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 MTSS1LQ765P7 747 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 NELFCDQ8IXH7 590 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 THEM5Q8N1Q8 247 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 LRRC52Q8N7C0 313 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 C1orf127Q8N9H9 656 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 ZNF512Q96ME7 567 aaPredicted RBP28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 PGLYRP2Q96PD5 576 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 AGAP1Q9UPQ3 857 aa28.52■■■□□ 2.16
CDKN2A-201ENST00000304494 ZNF197O14709 1029 aa28.51■■■□□ 2.15
CDKN2A-201ENST00000304494 CBWD2Q8IUF1 395 aa28.51■■■□□ 2.15
CDKN2A-201ENST00000304494 CSGALNACT2Q8N6G5 542 aa28.51■■■□□ 2.15
CDKN2A-201ENST00000304494 ANKRD36BP1Q96IX9 119 aa28.51■■■□□ 2.15
CDKN2A-201ENST00000304494 CORO1BQ9BR76 489 aa28.51■■■□□ 2.15
CDKN2A-201ENST00000304494 EXOC1Q9NV70 894 aa28.51■■■□□ 2.15
CDKN2A-201ENST00000304494 FBXL21Q9UKT6 434 aa28.51■■■□□ 2.15
CDKN2A-201ENST00000304494 R3HCC1Q9Y3T6 440 aaKnown RBP28.51■■■□□ 2.15
CDKN2A-201ENST00000304494 NUMBLQ9Y6R0 609 aa28.51■■■□□ 2.15
CDKN2A-201ENST00000304494 FAM237AA0A1B0GTK4 181 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 A0A1W2PQ27 194 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 A0A1W2PQ64 194 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 A0A1W2PQD8 194 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 RBP5P82980 135 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 PSMD2Q13200 908 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 PDZD4Q76G19 769 aaPredicted RBP28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 NPAS3Q8IXF0 933 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 FAM122AQ96E09 287 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 BORCS6Q96GS4 357 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 MTMR12Q9C0I1 747 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 MFSD1Q9H3U5 465 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 YIPF1Q9Y548 306 aa28.5■■■□□ 2.15
CDKN2A-201ENST00000304494 DOCK8Q8NF50 2099 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 TSC2P49815 1807 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 NARSO43776 548 aaKnown RBP28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 KLRC4O43908 158 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 MICAL2O94851 1124 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 TNNC2P02585 160 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 KRT19P08727 400 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 SRFP11831 508 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 PLA2G5P39877 138 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 NDUFA8P51970 172 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 SNRNP35Q16560 246 aaKnown RBP28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 KNOP1Q1ED39 458 aaKnown RBP28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 SLC5A9Q2M3M2 681 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 CYP4A22Q5TCH4 519 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 LEMD2Q8NC56 503 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 OR10T2Q8NGX3 314 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 GOLGA5Q8TBA6 731 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 PRRX2Q99811 253 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 INTS13Q9NVM9 706 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 GDE1Q9NZC3 331 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 HSFX1Q9UBD0 423 aa28.49■■■□□ 2.15
CDKN2A-201ENST00000304494 MTMR11A4FU01 709 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 VNN2O95498 520 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 PDGFBP01127 241 aaPredicted RBP28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 CYP2J2P51589 502 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 DUSP4Q13115 394 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 DUOXA2Q1HG44 320 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 WSCD1Q658N2 575 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 CENPPQ6IPU0 288 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 WDR49Q8IV35 697 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 C12orf56Q8IXR9 622 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 XXYLT1Q8NBI6 393 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 ING5Q8WYH8 240 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 TMEM209Q96SK2 561 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 ZCWPW1Q9H0M4 648 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 CEP72Q9P209 647 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 WNT16Q9UBV4 365 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 SCN1AP35498 2009 aa28.48■■■□□ 2.15
CDKN2A-201ENST00000304494 CLIC2O15247 247 aa28.47■■■□□ 2.15
CDKN2A-201ENST00000304494 ALDH1A3P47895 512 aa28.47■■■□□ 2.15
CDKN2A-201ENST00000304494 EPHB3P54753 998 aa28.47■■■□□ 2.15
CDKN2A-201ENST00000304494 NUCB2P80303 420 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms