RNA–Protein interactions for RNA: ENST00000301821.10

RPSA-201, Transcript of ribosomal protein SA, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPSA, Length 1,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-201ENST00000301821 UNQ6494/PRO21346Q6UXR6 183 aa11.15□□□□□ -0.62
RPSA-201ENST00000301821 CACNA2D4Q7Z3S7 1137 aa11.15□□□□□ -0.62
RPSA-201ENST00000301821 HAUS6Q7Z4H7 955 aa11.15□□□□□ -0.62
RPSA-201ENST00000301821 TMC8Q8IU68 726 aa11.15□□□□□ -0.62
RPSA-201ENST00000301821 ARID3BQ8IVW6 561 aaPredicted RBP11.15□□□□□ -0.62
RPSA-201ENST00000301821 APPL2Q8NEU8 664 aa11.15□□□□□ -0.62
RPSA-201ENST00000301821 TCEAL3Q969E4 200 aa11.15□□□□□ -0.62
RPSA-201ENST00000301821 LOXL4Q96JB6 756 aa11.15□□□□□ -0.62
RPSA-201ENST00000301821 SUSD3Q96L08 255 aa11.15□□□□□ -0.62
RPSA-201ENST00000301821 TBC1D32Q96NH3 1257 aa11.15□□□□□ -0.62
RPSA-201ENST00000301821 POLR3CQ9BUI4 534 aaPredicted RBP11.15□□□□□ -0.62
RPSA-201ENST00000301821 ZMIZ1Q9ULJ6 1067 aa11.15□□□□□ -0.62
RPSA-201ENST00000301821 NUP210Q8TEM1 1887 aaPredicted RBP11.15□□□□□ -0.63
RPSA-201ENST00000301821 PHLPP2Q6ZVD8 1323 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 CCDC169A6NNP5 214 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 K7ERI5 159 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 HOXA6P31267 233 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 RPL9P32969 192 aaKnown RBP11.14□□□□□ -0.63
RPSA-201ENST00000301821 CCT6AP40227 531 aaKnown RBP11.14□□□□□ -0.63
RPSA-201ENST00000301821 NOVA1P51513 510 aaKnown RBP11.14□□□□□ -0.63
RPSA-201ENST00000301821 TNK2Q07912 1038 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 FOXC1Q12948 553 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 PLD1Q13393 1074 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 ALKAL1Q6UXT8 129 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 TMEM130Q8N3G9 435 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 ERMNQ8TAM6 284 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 SNX29Q8TEQ0 813 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 ACAP3Q96P50 834 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 LRRC3BQ96PB8 259 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 EDEM2Q9BV94 578 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 LSM14BQ9BX40 385 aaKnown RBP11.14□□□□□ -0.63
RPSA-201ENST00000301821 LRRC3Q9BY71 257 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 DNAJC25Q9H1X3 360 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 BHMT2Q9H2M3 363 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 CRISPLD1Q9H336 500 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 ATXN3LQ9H3M9 355 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 CNTN3Q9P232 1028 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 TUBGCP4Q9UGJ1 667 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 MAFFQ9ULX9 164 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 NOL7Q9UMY1 257 aaKnown RBP11.14□□□□□ -0.63
RPSA-201ENST00000301821 PCDHB8Q9UN66 801 aa11.14□□□□□ -0.63
RPSA-201ENST00000301821 TIMM13Q9Y5L4 95 aaPredicted RBP11.14□□□□□ -0.63
RPSA-201ENST00000301821 KIF26AQ9ULI4 1882 aaPredicted RBP11.14□□□□□ -0.63
RPSA-201ENST00000301821 CACNA1GO43497 2377 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 VNN2O95498 520 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 PRAMEF12O95522 483 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 KCNE1P15382 129 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 SPINK2P20155 84 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 U2AF2P26368 475 aaKnown RBP eCLIP11.13□□□□□ -0.63not detected■■□□□ 12.5
RPSA-201ENST00000301821 MARCKSP29966 332 aaPredicted RBP11.13□□□□□ -0.63
RPSA-201ENST00000301821 CDC25AP30304 524 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 RAP1GAPP47736 663 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 EPHB3P54753 998 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 YWHAHQ04917 246 aaPredicted RBP11.13□□□□□ -0.63
RPSA-201ENST00000301821 DUSP4Q13115 394 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 ORC2Q13416 577 aaPredicted RBP11.13□□□□□ -0.63
RPSA-201ENST00000301821 IL17AQ16552 155 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 PLA2G2CQ5R387 149 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 GPR158Q5T848 1215 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 HAUS3Q68CZ6 603 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 SYNPOQ8N3V7 929 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 BPIFB1Q8TDL5 484 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 KIFAP3Q92845 792 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 KIF12Q96FN5 646 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 ACO2Q99798 780 aaKnown RBP11.13□□□□□ -0.63
RPSA-201ENST00000301821 TCHPQ9BT92 498 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 MKNK1Q9BUB5 465 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 TARS2Q9BW92 718 aaKnown RBP11.13□□□□□ -0.63
RPSA-201ENST00000301821 MRPL4Q9BYD3 311 aaKnown RBP11.13□□□□□ -0.63
RPSA-201ENST00000301821 DDX19AQ9NUU7 478 aaKnown RBP11.13□□□□□ -0.63
RPSA-201ENST00000301821 LRWD1Q9UFC0 647 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 SLC8A2Q9UPR5 921 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 KIAA1024Q9UPX6 916 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 SLC27A5Q9Y2P5 690 aa11.13□□□□□ -0.63
RPSA-201ENST00000301821 E9PMD0 336 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 GIPC1O14908 333 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 MEFVO15553 781 aaPredicted RBP11.12□□□□□ -0.63
RPSA-201ENST00000301821 SOAT2O75908 522 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 MCF2P10911 925 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 GABRR2P28476 465 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 ALDH1A3P47895 512 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 TRAPPC10P48553 1259 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 PEX3P56589 373 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 CYP4F8P98187 520 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 ZNF252P-AS1Q0IIN9 211 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 ITPRIPL2Q3MIP1 535 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 ARHGAP15Q53QZ3 475 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 MCTP1Q6DN14 999 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 GAREM2Q75VX8 874 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 TTC9BQ8N6N2 239 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 BEST2Q8NFU1 509 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 HHIPQ96QV1 700 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 TMEM209Q96SK2 561 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 SMG9Q9H0W8 520 aaKnown RBP11.12□□□□□ -0.63
RPSA-201ENST00000301821 PTPRHQ9HD43 1115 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 VPS45Q9NRW7 570 aa11.12□□□□□ -0.63
RPSA-201ENST00000301821 POLR3BQ9NW08 1133 aaPredicted RBP11.12□□□□□ -0.63
RPSA-201ENST00000301821 ANKFY1Q9P2R3 1169 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms