RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 ZNF512BQ96KM6 892 aaPredicted RBP7.49□□□□□ -1.21
RAG1-201ENST00000299440 CCDC3Q9BQI4 270 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 MTA3Q9BTC8 594 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 WDCPQ9H6R7 721 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 EPB41L5Q9HCM4 733 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 CACNA2D2Q9NY47 1150 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 CEP72Q9P209 647 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 PCDHGB4Q9UN71 923 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 SOWAHDA6NJG2 315 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 M0QYT0 321 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 KCNN4O15554 427 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 ACSL3O95573 720 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 CTSEP14091 401 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 EPHB2P29323 1055 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 C2orf54Q08AI8 447 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 GLE1Q53GS7 698 aaKnown RBP7.49□□□□□ -1.21
RAG1-201ENST00000299440 FASTKD1Q53R41 847 aaKnown RBP7.49□□□□□ -1.21
RAG1-201ENST00000299440 MPZL3Q6UWV2 235 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 ZNF507Q8TCN5 953 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 OTULINQ96BN8 352 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 PDCD2LQ9BRP1 358 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 TSEN34Q9BSV6 310 aaKnown RBP7.49□□□□□ -1.21
RAG1-201ENST00000299440 MTMR12Q9C0I1 747 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 ABCG4Q9H172 646 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 PDZK1P1A8MUH7 402 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 ACAT1P24752 427 aaKnown RBP7.49□□□□□ -1.21
RAG1-201ENST00000299440 OXCT1P55809 520 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 SRRM1Q8IYB3 904 aaKnown RBP7.49□□□□□ -1.21
RAG1-201ENST00000299440 REM2Q8IYK8 340 aaPredicted RBP7.49□□□□□ -1.21
RAG1-201ENST00000299440 SLAIN1Q8ND83 568 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 FAM114A2Q9NRY5 505 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 ORC6Q9Y5N6 252 aa7.49□□□□□ -1.21
RAG1-201ENST00000299440 MRPL42Q9Y6G3 142 aaKnown RBP7.49□□□□□ -1.21
RAG1-201ENST00000299440 SPATA31D3P0C874 917 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 FGFR1P11362 822 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 GFAPP14136 432 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 FGFR2P21802 821 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 HOXA7P31268 230 aaPredicted RBP7.48□□□□□ -1.21
RAG1-201ENST00000299440 RHOAP61586 193 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 ZNF284Q2VY69 593 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 SPATA31D4Q6ZUB0 917 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 ZFPM1Q8IX07 1006 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 DDIASQ8IXT1 998 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 REPS2Q8NFH8 660 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 RDM1Q8NG50 284 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 OMDQ99983 421 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 DDX43Q9NXZ2 648 aaKnown RBP7.48□□□□□ -1.21
RAG1-201ENST00000299440 RCOR1Q9UKL0 485 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 CDY2AQ9Y6F7 541 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 RFX7Q2KHR2 1363 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 CXCL14O95715 111 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 GTF2H1P32780 548 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 RAP1GAPP47736 663 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 SLC26A2P50443 739 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 GFPT1Q06210 699 aaPredicted RBP7.48□□□□□ -1.21
RAG1-201ENST00000299440 LAMTOR4Q0VGL1 99 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 EFHC1Q5JVL4 640 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 SPDYAQ5MJ70 313 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 DOK6Q6PKX4 331 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 PPM1NQ8N819 430 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 SUSD6Q92537 303 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 NIF3L1Q9GZT8 377 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 IQGAP3Q86VI3 1631 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 DIP2BQ9P265 1576 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 IQANK1A0A1B0GTG1 560 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 SLC2A3P11169 496 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 PPIGQ13427 754 aaKnown RBP eCLIP7.48□□□□□ -1.21
RAG1-201ENST00000299440 PDIA5Q14554 519 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 PGM5Q15124 567 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 NFE2Q16621 373 aaPredicted RBP7.48□□□□□ -1.21
RAG1-201ENST00000299440 GPAT2Q6NUI2 795 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 SGMS1Q86VZ5 419 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 DDX27Q96GQ7 796 aaKnown RBP7.48□□□□□ -1.21
RAG1-201ENST00000299440 EPC1Q9H2F5 836 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 NDRG2Q9UN36 371 aaKnown RBP7.48□□□□□ -1.21
RAG1-201ENST00000299440 SPHKAPQ2M3C7 1700 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 WDR19Q8NEZ3 1342 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 TRPM1Q7Z4N2 1603 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 OPLAHO14841 1288 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 ARHGDIAP52565 204 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 IL9RQ01113 521 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 SLC39A12Q504Y0 691 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 BRD9Q9H8M2 597 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 TLR8Q9NR97 1041 aaKnown RBP7.48□□□□□ -1.21
RAG1-201ENST00000299440 DDX56Q9NY93 547 aaKnown RBP7.48□□□□□ -1.21
RAG1-201ENST00000299440 PCDHAC2Q9Y5I4 1007 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 RASGRF2O14827 1237 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 INHAP05111 366 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 MYBL1P10243 752 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 CAPZA2P47755 286 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 EPC2Q52LR7 807 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 CCDC149Q6ZUS6 474 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 HELQQ8TDG4 1101 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 MORC4Q8TE76 937 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 ATP8B4Q8TF62 1192 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 POLR3CQ9BUI4 534 aaPredicted RBP7.48□□□□□ -1.21
RAG1-201ENST00000299440 CALCOCO1Q9P1Z2 691 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 MAD2L2Q9UI95 211 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 LCMT1Q9UIC8 334 aa7.48□□□□□ -1.21
RAG1-201ENST00000299440 CCDC151A5D8V7 595 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms