RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 UBL4BQ8N7F7 174 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 BSNDQ8WZ55 320 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 GRAMD1AQ96CP6 724 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 CEP170P1Q96L14 293 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 DCLRE1BQ9H816 532 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 ACP6Q9NPH0 428 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 NCANO14594 1321 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 EMSYQ7Z589 1322 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
CAGE1-201ENST00000296742 THAP12O43422 761 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 SKIP12755 728 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 PLS3P13797 630 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 ANXA13P27216 316 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 VHLP40337 213 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 BFSP1Q12934 665 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 VGLL4Q14135 290 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 RCN1Q15293 331 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 CMPK2Q5EBM0 449 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 SEL1L2Q5TEA6 688 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 PHLDB3Q6NSJ2 640 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 STXBP4Q6ZWJ1 553 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 TRIM74Q86UV6 250 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 TRIM73Q86UV7 250 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 DTX3LQ8TDB6 740 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 SCG3Q8WXD2 468 aaKnown RBP13.21□□□□□ -0.29
CAGE1-201ENST00000296742 INPP5DQ92835 1189 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 GBP5Q96PP8 586 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 DMAC2Q9NW81 257 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 ASIC3Q9UHC3 531 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 USH1CQ9Y6N9 552 aa13.21□□□□□ -0.29
CAGE1-201ENST00000296742 SPAG7O75391 227 aa13.21□□□□□ -0.3
CAGE1-201ENST00000296742 T-ENOLP0DO92 83 aa13.21□□□□□ -0.3
CAGE1-201ENST00000296742 CCND2P30279 289 aa13.21□□□□□ -0.3
CAGE1-201ENST00000296742 IL9RQ01113 521 aa13.21□□□□□ -0.3
CAGE1-201ENST00000296742 TRIP13Q15645 432 aaPredicted RBP13.21□□□□□ -0.3
CAGE1-201ENST00000296742 WASHC2DQ5SRD0 308 aa13.21□□□□□ -0.3
CAGE1-201ENST00000296742 CATSPERGQ6ZRH7 1159 aa13.21□□□□□ -0.3
CAGE1-201ENST00000296742 CYFIP1Q7L576 1253 aa13.21□□□□□ -0.3
CAGE1-201ENST00000296742 APOBEC3FQ8IUX4 373 aaKnown RBP13.21□□□□□ -0.3
CAGE1-201ENST00000296742 CCDC60Q8IWA6 550 aaPredicted RBP13.21□□□□□ -0.3
CAGE1-201ENST00000296742 KAT5Q92993 513 aa13.21□□□□□ -0.3
CAGE1-201ENST00000296742 STRA6Q9BX79 667 aa13.21□□□□□ -0.3
CAGE1-201ENST00000296742 KCND2Q9NZV8 630 aa13.21□□□□□ -0.3
CAGE1-201ENST00000296742 PHTF1Q9UMS5 762 aa13.21□□□□□ -0.3
CAGE1-201ENST00000296742 USP2O75604 605 aaPredicted RBP13.2□□□□□ -0.3
CAGE1-201ENST00000296742 CETPP11597 493 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 COILP38432 576 aaPredicted RBP13.2□□□□□ -0.3
CAGE1-201ENST00000296742 RASSF2P50749 326 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 YARSP54577 528 aaKnown RBP13.2□□□□□ -0.3
CAGE1-201ENST00000296742 MYL7Q01449 175 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 MESDQ14696 234 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 NIPA1Q7RTP0 329 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 CBWD2Q8IUF1 395 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 SLC30A5Q8TAD4 765 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 NSUN6Q8TEA1 469 aaKnown RBP13.2□□□□□ -0.3
CAGE1-201ENST00000296742 IFT43Q96FT9 208 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 PWWP2AQ96N64 755 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 DDX50Q9BQ39 737 aaKnown RBP13.2□□□□□ -0.3
CAGE1-201ENST00000296742 TEX13BQ9BXU2 312 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 INTS2Q9H0H0 1204 aaKnown RBP13.2□□□□□ -0.3
CAGE1-201ENST00000296742 AAASQ9NRG9 546 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 HSPBP1Q9NZL4 362 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 PCDHA10Q9Y5I2 948 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 KIAA1217Q5T5P2 1943 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 SSC5DA1L4H1 1573 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 ECEL1O95672 775 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 UBTFL6P0CB48 400 aaPredicted RBP13.2□□□□□ -0.3
CAGE1-201ENST00000296742 PYGMP11217 842 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 HSPA6P17066 643 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 TNFAIP3P21580 790 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 CTNNA2P26232 953 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 MARK3P27448 753 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 SOX5P35711 763 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 VPS41P49754 854 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 RASIP1Q5U651 963 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 PPP1R21Q6ZMI0 780 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 ANKRD35Q8N283 1001 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 FBXO41Q8TF61 875 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 BICD1Q96G01 975 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 TRAPPC9Q96Q05 1148 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 SEPT9Q9UHD8 586 aaPredicted RBP13.2□□□□□ -0.3
CAGE1-201ENST00000296742 AFG3L2Q9Y4W6 797 aa13.2□□□□□ -0.3
CAGE1-201ENST00000296742 RASA4BC9J798 803 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 FOXN3O00409 490 aaPredicted RBP13.19□□□□□ -0.3
CAGE1-201ENST00000296742 RASA4O43374 803 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 DCTN3O75935 186 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 KCNA2P16389 499 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 MUTP22033 750 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 ADSSP30520 456 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 GSTT1P30711 240 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 NPTX2P47972 431 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 DYNC1I2Q13409 638 aaKnown RBP13.19□□□□□ -0.3
CAGE1-201ENST00000296742 TMED2Q15363 201 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 CLUL1Q15846 466 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 TAF1BQ53T94 588 aaPredicted RBP13.19□□□□□ -0.3
CAGE1-201ENST00000296742 DSTYKQ6XUX3 929 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 PRUNE1Q86TP1 453 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 C4orf19Q8IY42 314 aa13.19□□□□□ -0.3
CAGE1-201ENST00000296742 CLMNQ96JQ2 1002 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms