RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 HOXA10P31260 410 aaPredicted RBP15.53■□□□□ 0.08
CCNF-201ENST00000293968 YARSP54577 528 aaKnown RBP15.53■□□□□ 0.08
CCNF-201ENST00000293968 CCDC62Q6P9F0 684 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 PDCD7Q8N8D1 485 aaKnown RBP15.53■□□□□ 0.08
CCNF-201ENST00000293968 DDX1Q92499 740 aaKnown RBP15.53■□□□□ 0.08
CCNF-201ENST00000293968 PRMT6Q96LA8 375 aaPredicted RBP15.53■□□□□ 0.08
CCNF-201ENST00000293968 ZWILCHQ9H900 591 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 C2orf71A6NGG8 1288 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 GTF2BQ00403 316 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 KLC1Q07866 573 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 ACVR2BQ13705 512 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 TFDP1Q14186 410 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 ZRSR2Q15696 482 aaKnown RBP15.53■□□□□ 0.08
CCNF-201ENST00000293968 AOC3Q16853 763 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 ANKS1BQ7Z6G8 1248 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 FBXO41Q8TF61 875 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 TTC25Q96NG3 672 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 PSMC3IPQ9P2W1 217 aaPredicted RBP15.53■□□□□ 0.08
CCNF-201ENST00000293968 ARFGEF1Q9Y6D6 1849 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 SPDYE5A6NIY4 337 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 ECE2O60344 883 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 TJP3O95049 919 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 GPC3P51654 580 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 PDK4Q16654 411 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 PPFIBP2Q8ND30 876 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 RFWD2Q8NHY2 731 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 IQCGQ9H095 443 aaKnown RBP15.52■□□□□ 0.08
CCNF-201ENST00000293968 DNALI1O14645 258 aaPredicted RBP15.52■□□□□ 0.08
CCNF-201ENST00000293968 RPL7AP62424 266 aaKnown RBP15.52■□□□□ 0.08
CCNF-201ENST00000293968 CYP24A1Q07973 514 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 TCEAL1Q15170 157 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 HIF1AQ16665 826 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 ANO7Q6IWH7 933 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 RIBC1Q8N443 379 aaPredicted RBP15.52■□□□□ 0.08
CCNF-201ENST00000293968 ZNF483Q8TF39 744 aaPredicted RBP15.52■□□□□ 0.08
CCNF-201ENST00000293968 STOML1Q9UBI4 398 aa15.52■□□□□ 0.08
CCNF-201ENST00000293968 NHSQ6T4R5 1651 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 MYH11P35749 1972 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 HLA-DRAP01903 254 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 LINGO3P0C6S8 592 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 ESRRAP11474 423 aaPredicted RBP15.52■□□□□ 0.07
CCNF-201ENST00000293968 DSG3P32926 999 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 RFC5P40937 340 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 CCDC15Q0P6D6 951 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 PARP6Q2NL67 630 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 SMTNL2Q2TAL5 461 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 KHDC1Q4VXA5 237 aaKnown RBP15.52■□□□□ 0.07
CCNF-201ENST00000293968 LRRC6Q86X45 466 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 GPD1LQ8N335 351 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 MCEEQ96PE7 176 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 STRA6Q9BX79 667 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 TRIM55Q9BYV6 548 aa15.52■□□□□ 0.07
CCNF-201ENST00000293968 GLIS2Q9BZE0 524 aaPredicted RBP15.52■□□□□ 0.07
CCNF-201ENST00000293968 GOLGB1Q14789 3259 aaKnown RBP15.52■□□□□ 0.07
CCNF-201ENST00000293968 PTPN4P29074 926 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 ARFIP2P53365 341 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 BPIFB4P59827 614 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 BASP1P80723 227 aaKnown RBP15.51■□□□□ 0.07
CCNF-201ENST00000293968 MAPK6Q16659 721 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 TKFCQ3LXA3 575 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 SEZ6Q53EL9 994 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 AEBP2Q6ZN18 517 aaPredicted RBP15.51■□□□□ 0.07
CCNF-201ENST00000293968 C3orf62Q6ZUJ4 267 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 PODNQ7Z5L7 613 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 CTAGE3PQ8IX95 158 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 TCP10LQ8TDR4 215 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 RSAD2Q8WXG1 361 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 VCXQ9H320 206 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 RAVER2Q9HCJ3 691 aaKnown RBP15.51■□□□□ 0.07
CCNF-201ENST00000293968 FBXO6Q9NRD1 293 aaPredicted RBP15.51■□□□□ 0.07
CCNF-201ENST00000293968 ACTL7BQ9Y614 415 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 IVNS1ABPQ9Y6Y0 642 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 KRT36O76013 467 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 GNAT1P11488 350 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 GAD2Q05329 585 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 MAMLD1Q13495 774 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 CAPN9O14815 690 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 GRIN3BO60391 1043 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 PHBP35232 272 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 KPNB1Q14974 876 aaKnown RBP15.51■□□□□ 0.07
CCNF-201ENST00000293968 ZNF568Q3ZCX4 644 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 TEX9Q8N6V9 391 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 TEKT4Q8WW24 435 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 INPP5DQ92835 1189 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 COL20A1Q9P218 1284 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 USP21Q9UK80 565 aa15.51■□□□□ 0.07
CCNF-201ENST00000293968 PSTPIP1O43586 416 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 TCEA3O75764 348 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 BAG2O95816 211 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 MT-ND3P03897 115 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 CC2D2BQ6DHV5 1058 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 SLC7A6OSQ96CW6 309 aaPredicted RBP15.5■□□□□ 0.07
CCNF-201ENST00000293968 ARMCX1Q9P291 453 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 SLC17A7Q9P2U7 560 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 F8VP50 259 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 POLRMTO00411 1230 aaKnown RBP15.5■□□□□ 0.07
CCNF-201ENST00000293968 LIASO43766 372 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 T-ENOLP0DO92 83 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 UNGP13051 313 aaPredicted RBP15.5■□□□□ 0.07
CCNF-201ENST00000293968 MUTP22033 750 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms