RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 IQCEQ6IPM2 695 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 PDZD4Q76G19 769 aaPredicted RBP11.32□□□□□ -0.6
SNF8-201ENST00000290330 NT5DC4Q86YG4 428 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 CCDC65Q8IXS2 484 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 SYCP3Q8IZU3 236 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 ELMOD1Q8N336 334 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 ATOH1Q92858 354 aaPredicted RBP11.32□□□□□ -0.6
SNF8-201ENST00000290330 DHX58Q96C10 678 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 TCEAL4Q96EI5 215 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 SAAL1Q96ER3 474 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 BORCS6Q96GS4 357 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 ZNF512Q96ME7 567 aaPredicted RBP11.32□□□□□ -0.6
SNF8-201ENST00000290330 KXD1Q9BQD3 176 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 CBWD1Q9BRT8 395 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 TRIM9Q9C026 710 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 LRRC27Q9C0I9 530 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 CRISPLD1Q9H336 500 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 CUEDC2Q9H467 287 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 TMEM206Q9H813 350 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 TBC1D17Q9HA65 648 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 ARHGEF3Q9NR81 526 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 YIPF1Q9Y548 306 aa11.32□□□□□ -0.6
SNF8-201ENST00000290330 MTMR11A4FU01 709 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 NRG2O14511 850 aaPredicted RBP11.31□□□□□ -0.6
SNF8-201ENST00000290330 MOSPD3O75425 235 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 ECI2O75521 394 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 TAF6P49848 677 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 EPHA5P54756 1037 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 DUSP4Q13115 394 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 PKP1Q13835 747 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 FOXD4L6Q3SYB3 417 aaPredicted RBP11.31□□□□□ -0.6
SNF8-201ENST00000290330 CYP4A22Q5TCH4 519 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 CENPPQ6IPU0 288 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 PHLDB3Q6NSJ2 640 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 ARMCX5Q6P1M9 558 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 FOXD4L3Q6VB84 417 aaPredicted RBP11.31□□□□□ -0.6
SNF8-201ENST00000290330 BRSK2Q8IWQ3 736 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 CCDC105Q8IYK2 499 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 HS6ST3Q8IZP7 471 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 IQUBQ8NA54 791 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 ATAD1Q8NBU5 361 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 LEMD2Q8NC56 503 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 GLIS3Q8NEA6 775 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 OR10T2Q8NGX3 314 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 HPS3Q969F9 1004 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 GBP4Q96PP9 640 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 TMEM209Q96SK2 561 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 PYM1Q9BRP8 204 aaKnown RBP11.31□□□□□ -0.6
SNF8-201ENST00000290330 DSEQ9UL01 958 aa11.31□□□□□ -0.6
SNF8-201ENST00000290330 GOLGA8IPA6NC78 632 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 GOLGA8JA6NMD2 632 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 KPNA7A9QM74 516 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 CYB561D2O14569 222 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 EXTL3O43909 919 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 GJA1P17302 382 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 RFX1P22670 979 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 FCARP24071 287 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 STARD6P59095 220 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 TFAMQ00059 246 aaKnown RBP11.3□□□□□ -0.6
SNF8-201ENST00000290330 AMPD3Q01432 767 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 SNW1Q13573 536 aaKnown RBP11.3□□□□□ -0.6
SNF8-201ENST00000290330 FAM78AQ5JUQ0 283 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 ATL3Q6DD88 541 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 TANGO2Q6ICL3 276 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 CNNM4Q6P4Q7 775 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 TTC9BQ8N6N2 239 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 DTWD2Q8NBA8 298 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 SPRYD3Q8NCJ5 442 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 KCNG4Q8TDN1 519 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 ELSPBP1Q96BH3 223 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 ZSWIM3Q96MP5 696 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 ASB16Q96NS5 453 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 LRRC3Q9BY71 257 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 PLA2G2FQ9BZM2 168 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 ZCWPW1Q9H0M4 648 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 DNAJC25Q9H1X3 360 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 PCIF1Q9H4Z3 704 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 ASAH2Q9NR71 780 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 RBAKQ9NYW8 714 aaPredicted RBP11.3□□□□□ -0.6
SNF8-201ENST00000290330 HSFX1Q9UBD0 423 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 PCDHA7Q9UN72 937 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 SLC27A5Q9Y2P5 690 aa11.3□□□□□ -0.6
SNF8-201ENST00000290330 PIEZO1Q92508 2521 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
SNF8-201ENST00000290330 KIAA0391O15091 583 aaKnown RBP11.29□□□□□ -0.6
SNF8-201ENST00000290330 POLR2DO15514 142 aaKnown RBP11.29□□□□□ -0.6
SNF8-201ENST00000290330 MYL4P12829 197 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 HOXD13P35453 343 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 PNPLA4P41247 253 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 ALDH1A3P47895 512 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 ME1P48163 572 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 EPHB3P54753 998 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 ASIC1P78348 528 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 PFKPQ01813 784 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 PLD1Q13393 1074 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 SV2CQ496J9 727 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 SLC44A4Q53GD3 710 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 WSCD1Q658N2 575 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
SNF8-201ENST00000290330 STXBP4Q6ZWJ1 553 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms