RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 C11orf70Q9BRQ4 267 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 PJA2O43164 708 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 PSMD3O43242 534 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 TARSP26639 723 aaKnown RBP18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 ITGA8P53708 1063 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 SFSWAPQ12872 951 aaKnown RBP18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 GSTA3Q16772 222 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 ARHGEF26Q96DR7 871 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 ASPSCR1Q9BZE9 553 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 RAVER2Q9HCJ3 691 aaKnown RBP18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 NYAP2Q9P242 653 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 H3BRJ5 948 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 SERPINI2O75830 405 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 TRIM49P0CI25 452 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 TRIM49CP0CI26 452 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 FGFR2P21802 821 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 FMO5P49326 533 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 FXR2P51116 673 aaKnown RBP eCLIP18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 CATSPER4Q7RTX7 472 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 PRPF39Q86UA1 669 aaKnown RBP18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 PARVBQ9HBI1 364 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 UBE2Q2LH0YL09 131 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 TBC1D4O60343 1298 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 ATP9AO75110 1047 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 APOA4P06727 396 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 PSMC5P62195 406 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 PIGHQ14442 188 aaPredicted RBP18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 SLC13A5Q86YT5 568 aaPredicted RBP18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 SIX6OS1Q8N1H7 587 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 MDM1Q8TC05 714 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 FAM149B1Q96BN6 582 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 ZSWIM1Q9BR11 485 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 TAGLN3Q9UI15 199 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 NPHP3-ACAD11A0A0J9YXS1 232 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 DENND3A2RUS2 1198 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 CLPTM1O96005 669 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 GNA15P30679 374 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 RIN3Q8TB24 985 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 KRT35Q92764 455 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 ZNF839A8K0R7 811 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 FAM200BP0CF97 657 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 PTK7Q13308 1070 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 NTRK3Q16288 839 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 ZNF667Q5HYK9 610 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 HEATR6Q6AI08 1181 aaKnown RBP18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 KIAA1841Q6NSI8 718 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 C1orf131Q8NDD1 294 aaKnown RBP18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 SENP7Q9BQF6 1050 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 SYBUQ9NX95 663 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 SHPRHQ149N8 1683 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 SRP72O76094 671 aaKnown RBP18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 PSPC1Q8WXF1 523 aaKnown RBP18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 ZNF302Q9NR11 478 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 RPS12P25398 132 aaKnown RBP18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 RGS2P41220 211 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 YWHAHQ04917 246 aaPredicted RBP18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 UGP2Q16851 508 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 CNBD2Q96M20 576 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 ALG6Q9Y672 507 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 ZBTB7AO95365 584 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 SPP2Q13103 211 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 PPIL6Q8IXY8 311 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 DACH2Q96NX9 599 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 RHBDL2Q9NX52 303 aa18.35■□□□□ 0.53
PCDHA13-201ENST00000289272 PSTPIP1O43586 416 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 SYF2O95926 243 aaKnown RBP18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 EEPD1Q7L9B9 569 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 TNIP2Q8NFZ5 429 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 SLC13A1Q9BZW2 595 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 MAD2L2Q9UI95 211 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 EMSYQ7Z589 1322 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 AK9Q5TCS8 1911 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 PECAM1P16284 738 aaPredicted RBP18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 HMOX2P30519 316 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 RAP1GDS1P52306 607 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 SYCP2LQ5T4T6 812 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 SMIM5Q71RC9 77 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 PAK5Q9P286 719 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 BCAR1P56945 870 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 PPP4CP60510 307 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 PPP1R2P1Q96PQ5 205 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 FAM213AQ9BRX8 229 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 DMGDHQ9UI17 866 aaKnown RBP18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 FIS1Q9Y3D6 152 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 KANSL1LA0AUZ9 987 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 NMT1P30419 496 aaKnown RBP18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 CDC42EP1Q00587 391 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 BTBD7Q9P203 1132 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 GTF3C4Q9UKN8 822 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 COMMD3-BMI1R4GMX3 469 aa18.34■□□□□ 0.53
PCDHA13-201ENST00000289272 CLDN3O15551 220 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 SRGAP2CP0DJJ0 459 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 SARSP49591 514 aaKnown RBP18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 PTENP60484 403 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 OSTNP61366 133 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 TRIM60Q495X7 471 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 ZNF746Q6NUN9 644 aaPredicted RBP18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 SCARA5Q6ZMJ2 495 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 TMPRSS6Q8IU80 811 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 PLD3Q8IV08 490 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms