RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 KIF3CO14782 793 aa19.08■□□□□ 0.65
CAPN1-201ENST00000279247 CTNNA1P35221 906 aaKnown RBP19.08■□□□□ 0.65
CAPN1-201ENST00000279247 ASPAP45381 313 aa19.08■□□□□ 0.65
CAPN1-201ENST00000279247 MAMLD1Q13495 774 aa19.08■□□□□ 0.65
CAPN1-201ENST00000279247 TTC27Q6P3X3 843 aa19.08■□□□□ 0.65
CAPN1-201ENST00000279247 CD101Q93033 1021 aa19.08■□□□□ 0.65
CAPN1-201ENST00000279247 ARL8AQ96BM9 186 aa19.08■□□□□ 0.65
CAPN1-201ENST00000279247 MCEEQ96PE7 176 aa19.08■□□□□ 0.65
CAPN1-201ENST00000279247 PCDHA3Q9Y5H8 950 aa19.08■□□□□ 0.65
CAPN1-201ENST00000279247 CCDC66A2RUB6 948 aa19.08■□□□□ 0.64
CAPN1-201ENST00000279247 TCF4P15884 667 aa19.08■□□□□ 0.64
CAPN1-201ENST00000279247 PLTPP55058 493 aa19.08■□□□□ 0.64
CAPN1-201ENST00000279247 ENPEPQ07075 957 aa19.08■□□□□ 0.64
CAPN1-201ENST00000279247 TRIP13Q15645 432 aaPredicted RBP19.08■□□□□ 0.64
CAPN1-201ENST00000279247 SLC10A6Q3KNW5 377 aa19.08■□□□□ 0.64
CAPN1-201ENST00000279247 OLFML2BQ68BL8 750 aa19.08■□□□□ 0.64
CAPN1-201ENST00000279247 CCDC137Q6PK04 289 aaKnown RBP19.08■□□□□ 0.64
CAPN1-201ENST00000279247 SLC13A5Q86YT5 568 aaPredicted RBP19.08■□□□□ 0.64
CAPN1-201ENST00000279247 SLITRK6Q9H5Y7 841 aa19.08■□□□□ 0.64
CAPN1-201ENST00000279247 MED4Q9NPJ6 270 aa19.08■□□□□ 0.64
CAPN1-201ENST00000279247 NPTXRO95502 500 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 RARAP10276 462 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 VPS41P49754 854 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 AP3M2P53677 418 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 SURF1Q15526 300 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 TTC19Q6DKK2 380 aaPredicted RBP19.07■□□□□ 0.64
CAPN1-201ENST00000279247 DCUN1D2Q6PH85 259 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 CATSPER4Q7RTX7 472 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 SH2D3CQ8N5H7 860 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 RNF25Q96BH1 459 aaPredicted RBP19.07■□□□□ 0.64
CAPN1-201ENST00000279247 TWNKQ96RR1 684 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 SLC45A1Q9Y2W3 748 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 TSPAN1O60635 241 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 AOC2O75106 756 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 MTA2O94776 668 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 ECHS1P30084 290 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 TAS2R40P59535 323 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 KAZNQ674X7 775 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 TLK2Q86UE8 772 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 JAMLQ86YT9 394 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 KIF12Q96FN5 646 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 HERPUD2Q9BSE4 406 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 SDCBP2Q9H190 292 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 RABEP2Q9H5N1 569 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 TRIP11Q15643 1979 aa19.07■□□□□ 0.64
CAPN1-201ENST00000279247 B4GALT4O60513 344 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 MYL3P08590 195 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 KCNN1Q92952 543 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 CAVIN3Q969G5 261 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 ADPGKQ9BRR6 497 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 TRIP12Q14669 1992 aaPredicted RBP19.06■□□□□ 0.64
CAPN1-201ENST00000279247 CRHR2Q13324 411 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 DENND1BQ6P3S1 775 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 DNAJB3Q8WWF6 145 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 ARHGAP39Q9C0H5 1083 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 ATP8A1Q9Y2Q0 1164 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 GOLGA6CA6NDK9 693 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 GOLGA6DP0CG33 693 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 TMEM132DQ14C87 1099 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 IFNL1Q8IU54 200 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 ACAP3Q96P50 834 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 SYNCQ9H7C4 482 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 SNTG2Q9NY99 539 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 GOLGA6AQ9NYA3 693 aa19.06■□□□□ 0.64
CAPN1-201ENST00000279247 TTC7AQ9ULT0 858 aaPredicted RBP19.06■□□□□ 0.64
CAPN1-201ENST00000279247 LOC102724159A0A0B4J2E5 919 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 RBM47A0AV96 593 aaKnown RBP19.05■□□□□ 0.64
CAPN1-201ENST00000279247 SMIM10L2AP0DMW4 78 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 SMIM10L2BP0DMW5 78 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 AARSP49588 968 aaKnown RBP eCLIP19.05■□□□□ 0.64
CAPN1-201ENST00000279247 PWP2Q15269 919 aaKnown RBP19.05■□□□□ 0.64
CAPN1-201ENST00000279247 RUFY4Q6ZNE9 571 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 ERICH1Q86X53 443 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 UHMK1Q8TAS1 419 aaKnown RBP19.05■□□□□ 0.64
CAPN1-201ENST00000279247 RUBCNQ92622 972 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 EIF2AQ9BY44 585 aaKnown RBP19.05■□□□□ 0.64
CAPN1-201ENST00000279247 MTUS1Q9ULD2 1270 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 PLAAQ9Y263 795 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 PASKQ96RG2 1323 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 FAM155AB1AL88 458 aaPredicted RBP19.05■□□□□ 0.64
CAPN1-201ENST00000279247 PHF2O75151 1096 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 CYP2C9P11712 490 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 TNFRSF8P28908 595 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 POU5F1Q01860 360 aaKnown RBP19.05■□□□□ 0.64
CAPN1-201ENST00000279247 DHX9Q08211 1270 aaKnown RBP19.05■□□□□ 0.64
CAPN1-201ENST00000279247 SGO2Q562F6 1265 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 IQSEC1Q6DN90 963 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 DNAJC24Q6P3W2 148 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 ZNF467Q7Z7K2 595 aaPredicted RBP19.05■□□□□ 0.64
CAPN1-201ENST00000279247 TMEM35BQ8NCS4 154 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 TRIM11Q96F44 468 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 HPDLQ96IR7 371 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 KLK14Q9P0G3 267 aa19.05■□□□□ 0.64
CAPN1-201ENST00000279247 F8VP50 259 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 AKAP5P24588 427 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 CTGFP29279 349 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 ZNF132P52740 706 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 MAP2K5Q13163 448 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 HIC1Q14526 733 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 CEP85LQ5SZL2 805 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms