RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 TISP43B9A030 160 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 TULP1O00294 542 aaPredicted RBP13.83□□□□□ -0.2
CD44-203ENST00000278386 MAN2B1O00754 1011 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 SPTLC1O15269 473 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 MOSPD3O75425 235 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 VNN2O95498 520 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 TYMPP19971 482 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 ACOT2P49753 483 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 EPHA5P54756 1037 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 GPR17Q13304 367 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 MYBPC2Q14324 1141 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 ZNF528Q3MIS6 628 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 ZC2HC1CQ53FD0 456 aaPredicted RBP13.83□□□□□ -0.2
CD44-203ENST00000278386 C9orf57Q5W0N0 161 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 ADALQ6DHV7 355 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 DYMQ7RTS9 669 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 FAM200AQ8TCP9 573 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 SENP8Q96LD8 212 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 ZSWIM3Q96MP5 696 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 TSPAN18Q96SJ8 248 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 NELL2Q99435 816 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 CRISPLD1Q9H336 500 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 ZNF334Q9HCZ1 680 aaPredicted RBP13.83□□□□□ -0.2
CD44-203ENST00000278386 PIAS3Q9Y6X2 628 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 EP300Q09472 2414 aaPredicted RBP13.83□□□□□ -0.2
CD44-203ENST00000278386 DCHS1Q96JQ0 3298 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 F5P12259 2224 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 HEPACAM2A8MVW5 462 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 ANKRD63C9JTQ0 380 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 ZNF263O14978 683 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 SOAT2O75908 522 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 TXLNAP40222 546 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 RPS9P46781 194 aaKnown RBP13.82□□□□□ -0.2
CD44-203ENST00000278386 LILRA4P59901 499 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 GTF2BQ00403 316 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 FOXK2Q01167 660 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 SFR1Q86XK3 245 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 TMC8Q8IU68 726 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 TTC9BQ8N6N2 239 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 ATAD1Q8NBU5 361 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 CSGALNACT1Q8TDX6 532 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 ATRIPQ8WXE1 791 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 RUBCNQ92622 972 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 CLDN23Q96B33 292 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 TMEM209Q96SK2 561 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 FIZ1Q96SL8 496 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 SEPT5Q99719 369 aaPredicted RBP13.82□□□□□ -0.2
CD44-203ENST00000278386 GPR88Q9GZN0 384 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 DNAJC25Q9H1X3 360 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 NCDNQ9UBB6 729 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 AGO2Q9UKV8 859 aaKnown RBP13.82□□□□□ -0.2
CD44-203ENST00000278386 SLC27A5Q9Y2P5 690 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 DERAQ9Y315 318 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 PCDHGA2Q9Y5H1 932 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 NCANO14594 1321 aa13.82□□□□□ -0.2
CD44-203ENST00000278386 OTOGLQ3ZCN5 2332 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 ADRB2P07550 413 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 PDCP20941 246 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 TAF6P49848 677 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 CDR1P51861 262 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 SLC39A12Q504Y0 691 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 ARHGAP15Q53QZ3 475 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 STXBP5Q5T5C0 1151 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 SLFN12LQ6IEE8 588 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 CENPPQ6IPU0 288 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 TSSK4Q6SA08 328 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 ITIH5Q86UX2 942 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 METTL23Q86XA0 190 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 MFSD6LQ8IWD5 586 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 OR10T2Q8NGX3 314 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 POMGNT1Q8WZA1 660 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 FAM3CQ92520 227 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 E2F7Q96AV8 911 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 EPSTI1Q96J88 318 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 GCNAQ96QF7 691 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 LPIN3Q9BQK8 851 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 PYM1Q9BRP8 204 aaKnown RBP13.81□□□□□ -0.2
CD44-203ENST00000278386 CCSER1Q9C0I3 900 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 ATXN3LQ9H3M9 355 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 ASB7Q9H672 318 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 TRPV4Q9HBA0 871 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 STK17AQ9UEE5 414 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 CCDC39Q9UFE4 941 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 DSEQ9UL01 958 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 CLIC4Q9Y696 253 aa13.81□□□□□ -0.2
CD44-203ENST00000278386 DPYSL4O14531 572 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 PAX3P23760 479 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 GABRR2P28476 465 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 DDIT3P35638 169 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 KPNA1P52294 538 aaPredicted RBP13.8□□□□□ -0.2
CD44-203ENST00000278386 CEBPZQ03701 1054 aaKnown RBP13.8□□□□□ -0.2
CD44-203ENST00000278386 MTAPQ13126 283 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 VEPH1Q14D04 833 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 MGAT5BQ3V5L5 792 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 USP49Q70CQ1 688 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 ERMP1Q7Z2K6 904 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 DCLK2Q8N568 766 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 PSMG2Q969U7 264 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 HVCN1Q96D96 273 aa13.8□□□□□ -0.2
CD44-203ENST00000278386 ZNF560Q96MR9 790 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms