RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TCRBV7S2A1N4TA0A589 114 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 GOLGA8IPA6NC78 632 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 GOLGA8JA6NMD2 632 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 DNM1LO00429 736 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 ATMINO43313 823 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-201ENST00000277198 FARP2O94887 1054 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-201ENST00000277198 CYBAP13498 195 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 RPS6P62753 249 aaKnown RBP13.73□□□□□ -0.21
C9orf3-201ENST00000277198 IFI35P80217 286 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-201ENST00000277198 UGCGQ16739 394 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 RELL1Q8IUW5 271 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 MCPH1Q8NEM0 835 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 GPRASP2Q96D09 838 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 SNF8Q96H20 258 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 PDCD2LQ9BRP1 358 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 RNF146Q9NTX7 359 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 PCDHA10Q9Y5I2 948 aa13.73□□□□□ -0.21
C9orf3-201ENST00000277198 ZNFX1Q9P2E3 1918 aaKnown RBP13.73□□□□□ -0.21
C9orf3-201ENST00000277198 DNAJC25-GNG10A0A024R161 153 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 FGFR4P22455 802 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 CNTN2Q02246 1040 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 OLFML2BQ68BL8 750 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 SMYD5Q6GMV2 418 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 TRIM72Q6ZMU5 477 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 C15orf39Q6ZRI6 1047 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 ANO5Q75V66 913 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 CCDC91Q7Z6B0 441 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 MCOLN2Q8IZK6 566 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 FUKQ8N0W3 1084 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 ATL2Q8NHH9 583 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 POMGNT1Q8WZA1 660 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 ATP6V0A1Q93050 837 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 LENG1Q96BZ8 264 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-201ENST00000277198 PAWRQ96IZ0 340 aaKnown RBP13.72□□□□□ -0.21
C9orf3-201ENST00000277198 VCPIP1Q96JH7 1222 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 TAAR1Q96RJ0 339 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 FOXP3Q9BZS1 431 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 PXMP2Q9NR77 195 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 ANAPC7Q9UJX3 599 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 TP73O15350 636 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 CLDN3O15551 220 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 DGAT1O75907 488 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 TTC4O95801 387 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 CCNE2O96020 404 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 OAZ1P54368 228 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 KRT17Q04695 432 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 CNGA2Q16280 664 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 EPS8L3Q8TE67 593 aaKnown RBP13.72□□□□□ -0.21
C9orf3-201ENST00000277198 SAAL1Q96ER3 474 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 BTBD6Q96KE9 485 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 RMDN3Q96TC7 470 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 PLCD4Q9BRC7 762 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 TRAIPQ9BWF2 469 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 MAF1Q9H063 256 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 CDC42EP4Q9H3Q1 356 aaKnown RBP13.72□□□□□ -0.21
C9orf3-201ENST00000277198 C1orf112Q9NSG2 853 aa13.72□□□□□ -0.21
C9orf3-201ENST00000277198 PSTPIP1O43586 416 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 SORBS3O60504 671 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 CYP1A1P04798 512 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-201ENST00000277198 EIF2AK2P19525 551 aaKnown RBP13.71□□□□□ -0.21
C9orf3-201ENST00000277198 IVDP26440 423 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 KCNJ1P48048 391 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 SLC39A4Q6P5W5 647 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 CYB5D1Q6P9G0 228 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 NLRX1Q86UT6 975 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 EXOC3L1Q86VI1 746 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 ANKRD35Q8N283 1001 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 PRMT1Q99873 361 aaKnown RBP13.71□□□□□ -0.21
C9orf3-201ENST00000277198 ACP6Q9NPH0 428 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 PDLIM7Q9NR12 457 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 AAASQ9NRG9 546 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 CHORDC1Q9UHD1 332 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-201ENST00000277198 OGDHLQ9ULD0 1010 aa13.71□□□□□ -0.21
C9orf3-201ENST00000277198 ATP9AO75110 1047 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 KRT5P13647 590 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 CCNG2Q16589 344 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 WDR44Q5JSH3 913 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 ARHGEF16Q5VV41 709 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 VSIG10LQ86VR7 867 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 LRRC34Q8IZ02 419 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 GBP7Q8N8V2 638 aaPredicted RBP13.71□□□□□ -0.22
C9orf3-201ENST00000277198 CCDC89Q8N998 374 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 DCLK3Q9C098 648 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 MRPL47Q9HD33 250 aaKnown RBP13.71□□□□□ -0.22
C9orf3-201ENST00000277198 ASIC3Q9UHC3 531 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 SLC12A4Q9UP95 1085 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 ACTL7BQ9Y614 415 aa13.71□□□□□ -0.22
C9orf3-201ENST00000277198 CFAP73A6NFT4 308 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 HNRNPDLO14979 420 aaKnown RBP13.7□□□□□ -0.22
C9orf3-201ENST00000277198 EXTL3O43909 919 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 PROSCO94903 275 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 DLATP10515 647 aaKnown RBP13.7□□□□□ -0.22
C9orf3-201ENST00000277198 CCND2P30279 289 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 NSFP46459 744 aaKnown RBP13.7□□□□□ -0.22
C9orf3-201ENST00000277198 PSMD6Q15008 389 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 SNCBQ16143 134 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 LIN9Q5TKA1 542 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 PLA2G4FQ68DD2 849 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 PARP9Q8IXQ6 854 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 CHST13Q8NET6 341 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms