RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 PCDHGC3Q9UN70 934 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 KAT6AQ92794 2004 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 FAM155AB1AL88 458 aaPredicted RBP10.2□□□□□ -0.78
TRIM55-201ENST00000276573 TNPO2O14787 897 aaKnown RBP10.2□□□□□ -0.78
TRIM55-201ENST00000276573 POLR3GO15318 223 aaPredicted RBP10.2□□□□□ -0.78
TRIM55-201ENST00000276573 PROSCO94903 275 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 LSM8O95777 96 aaKnown RBP10.2□□□□□ -0.78
TRIM55-201ENST00000276573 CDH5P33151 784 aaPredicted RBP10.2□□□□□ -0.78
TRIM55-201ENST00000276573 AARSP49588 968 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRIM55-201ENST00000276573 CDH8P55286 799 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 GABPB1Q06547 395 aaPredicted RBP10.2□□□□□ -0.78
TRIM55-201ENST00000276573 DCAF4L1Q3SXM0 396 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 RUFY4Q6ZNE9 571 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 CATSPER4Q7RTX7 472 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 FEZF2Q8TBJ5 459 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 SOCS4Q8WXH5 440 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRIM55-201ENST00000276573 APBA2Q99767 749 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 PLEKHA5Q9HAU0 1116 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 CYP3A43Q9HB55 503 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 ERVK-5Q9HDB9 667 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 PARVAQ9NVD7 372 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 DPP3Q9NY33 737 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 AGAP1Q9UPQ3 857 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 GINS2Q9Y248 185 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 C2CD2Q9Y426 696 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 MGAMO43451 1857 aa10.2□□□□□ -0.78
TRIM55-201ENST00000276573 GOLGA6L10A0A0M3HER8 536 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 TTI1O43156 1089 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 NPTXRO95502 500 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 PAEPP09466 180 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 FAM153BP0C7A2 387 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 DARSP14868 501 aaKnown RBP10.19□□□□□ -0.78
TRIM55-201ENST00000276573 EIF4BP23588 611 aaKnown RBP10.19□□□□□ -0.78
TRIM55-201ENST00000276573 RAP1GAPP47736 663 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 TM4SF4P48230 202 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 RAD23BP54727 409 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 RBP5P82980 135 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 LACTBP83111 547 aaPredicted RBP10.19□□□□□ -0.78
TRIM55-201ENST00000276573 BEX3Q00994 111 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 CRHR2Q13324 411 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 PCBP1Q15365 356 aaKnown RBP eCLIP10.19□□□□□ -0.78
TRIM55-201ENST00000276573 FAM153CQ494X1 144 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 APBB1IPQ7Z5R6 666 aaPredicted RBP10.19□□□□□ -0.78
TRIM55-201ENST00000276573 SLC13A5Q86YT5 568 aaPredicted RBP10.19□□□□□ -0.78
TRIM55-201ENST00000276573 ZDHHC14Q8IZN3 488 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 WHAMMQ8TF30 809 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 DNAJB3Q8WWF6 145 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 CCDC102AQ96A19 550 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 HPDLQ96IR7 371 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 LHX5Q9H2C1 402 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 FAM153AQ9UHL3 310 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 ITGA11Q9UKX5 1188 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 TLL2Q9Y6L7 1015 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 SCINQ9Y6U3 715 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 PASKQ96RG2 1323 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 TREHO43280 583 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 MED7O43513 233 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 STAU1O95793 577 aaKnown RBP10.19□□□□□ -0.78
TRIM55-201ENST00000276573 CALB1P05937 261 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 P4HA1P13674 534 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 CTGFP29279 349 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 POLR2BP30876 1174 aaKnown RBP10.19□□□□□ -0.78
TRIM55-201ENST00000276573 GUCY2FP51841 1108 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 ZNF200P98182 395 aaPredicted RBP10.19□□□□□ -0.78
TRIM55-201ENST00000276573 SREBF2Q12772 1141 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 CUL1Q13616 776 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 SLC27A1Q6PCB7 646 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 PRELID2Q8N945 189 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 SLC4A11Q8NBS3 891 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 C1orf131Q8NDD1 294 aaKnown RBP10.19□□□□□ -0.78
TRIM55-201ENST00000276573 SEC14L1Q92503 715 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 ZBTB9Q96C00 473 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 OSMRQ99650 979 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 CELF4Q9BZC1 486 aaKnown RBP10.19□□□□□ -0.78
TRIM55-201ENST00000276573 SNTG2Q9NY99 539 aa10.19□□□□□ -0.78
TRIM55-201ENST00000276573 TCRBV5S1A1TA0A578 114 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 FAM187AA6NFU0 413 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 TMEM191CA6NGB0 347 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 AGPSO00116 658 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 FSCN2O14926 492 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 TLR3O15455 904 aaKnown RBP10.18□□□□□ -0.78
TRIM55-201ENST00000276573 PHF2O75151 1096 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 SYF2O95926 243 aaKnown RBP10.18□□□□□ -0.78
TRIM55-201ENST00000276573 CD19P15391 556 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 AXLP30530 894 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 CHRNA3P32297 505 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 PTGIRP43119 386 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 DHX34Q14147 1143 aaKnown RBP10.18□□□□□ -0.78
TRIM55-201ENST00000276573 ZBTB6Q15916 424 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 FSCN1Q16658 493 aaKnown RBP10.18□□□□□ -0.78
TRIM55-201ENST00000276573 ALS2CLQ60I27 953 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 DENND1BQ6P3S1 775 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 NOTUMQ6P988 496 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 ERICH1Q86X53 443 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 DDX42Q86XP3 938 aaKnown RBP eCLIP10.18□□□□□ -0.78
TRIM55-201ENST00000276573 NME8Q8N427 588 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 TSEN2Q8NCE0 465 aaKnown RBP10.18□□□□□ -0.78
TRIM55-201ENST00000276573 MAGOHBQ96A72 148 aaKnown RBP10.18□□□□□ -0.78
TRIM55-201ENST00000276573 KIF12Q96FN5 646 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms