RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 ZNF507Q8TCN5 953 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 GPR152Q8TDT2 470 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 SPATA32Q96LK8 384 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 CYP4F11Q9HBI6 524 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 FAM86C1Q9NVL1 165 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 RBAKQ9NYW8 714 aaPredicted RBP15.61■□□□□ 0.09
HMGN3-201ENST00000275036 HPSEQ9Y251 543 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 INSL5Q9Y5Q6 135 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 EIF3DO15371 548 aaKnown RBP eCLIP15.6■□□□□ 0.09
HMGN3-201ENST00000275036 TGFB1I1O43294 461 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 KLRC4O43908 158 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 LDHAP00338 332 aaKnown RBP15.6■□□□□ 0.09
HMGN3-201ENST00000275036 RHOP08100 348 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 SRFP11831 508 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 TYMPP19971 482 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 CMA1P23946 247 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 CCR2P41597 374 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 PTPN5P54829 565 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 ADCY1Q08828 1119 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 PRSS36Q5K4E3 855 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 TPGS2Q68CL5 300 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 RTL10Q7L3V2 364 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 CXorf38Q8TB03 319 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 NOC3LQ8WTT2 800 aaKnown RBP15.6■□□□□ 0.09
HMGN3-201ENST00000275036 SCFD1Q8WVM8 642 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 TCEAL4Q96EI5 215 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 BORCS6Q96GS4 357 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 TMEM209Q96SK2 561 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 PDE11AQ9HCR9 933 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 FBXL21Q9UKT6 434 aa15.6■□□□□ 0.09
HMGN3-201ENST00000275036 PRRG1O14668 218 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 GALR2O43603 387 aaPredicted RBP15.59■□□□□ 0.09
HMGN3-201ENST00000275036 CYP11A1P05108 521 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 SLFN14P0C7P3 912 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 CPB1P15086 417 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 CEBPBP17676 345 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 AOC1P19801 751 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 ELF1P32519 619 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 MRE11P49959 708 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 OVOS1Q6IE37 1185 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 STXBP4Q6ZWJ1 553 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 NT5DC4Q86YG4 428 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 CBWD2Q8IUF1 395 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 GPD1LQ8N335 351 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 C1orf127Q8N9H9 656 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 NXPE3Q969Y0 559 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 PAGE5Q96GU1 130 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 PGLYRP2Q96PD5 576 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 RTP3Q9BQQ7 232 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 MFSD1Q9H3U5 465 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 SLC39A2Q9NP94 309 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 CEP72Q9P209 647 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 WNT16Q9UBV4 365 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 AFF4Q9UHB7 1163 aaKnown RBP15.59■□□□□ 0.09
HMGN3-201ENST00000275036 CA14Q9ULX7 337 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 ZFP37Q9Y6Q3 630 aaPredicted RBP15.59■□□□□ 0.09
HMGN3-201ENST00000275036 PTPRJQ12913 1337 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 VPS13AQ96RL7 3174 aa15.59■□□□□ 0.09
HMGN3-201ENST00000275036 FAM237AA0A1B0GTK4 181 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 PVALEFA0A1B0GWK0 134 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 H0Y858 1186 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 TULP1O00294 542 aaPredicted RBP15.58■□□□□ 0.08
HMGN3-201ENST00000275036 MOSPD3O75425 235 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 LRG1P02750 347 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 ODC1P11926 461 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 TAF6P49848 677 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 CLCN5P51795 746 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 GPC5P78333 572 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 TFAMQ00059 246 aaKnown RBP15.58■□□□□ 0.08
HMGN3-201ENST00000275036 TWF1Q12792 350 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 LMBRD2Q68DH5 695 aaPredicted RBP15.58■□□□□ 0.08
HMGN3-201ENST00000275036 USP37Q86T82 979 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 NELFCDQ8IXH7 590 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 CEP57L1Q8IYX8 460 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 HS6ST3Q8IZP7 471 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 TTC9BQ8N6N2 239 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 OR10T2Q8NGX3 314 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 MCRS1Q96EZ8 462 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 PRRX2Q99811 253 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 KXD1Q9BQD3 176 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 CORO1BQ9BR76 489 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 PYM1Q9BRP8 204 aaKnown RBP15.58■□□□□ 0.08
HMGN3-201ENST00000275036 PLA2G2FQ9BZM2 168 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 GDPD2Q9HCC8 539 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 AVENQ9NQS1 362 aaPredicted RBP15.58■□□□□ 0.08
HMGN3-201ENST00000275036 SLC2A4RGQ9NR83 387 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 AGPAT3Q9NRZ7 376 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 HSPBP1Q9NZL4 362 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 MRPS23Q9Y3D9 190 aaKnown RBP15.58■□□□□ 0.08
HMGN3-201ENST00000275036 YIPF1Q9Y548 306 aa15.58■□□□□ 0.08
HMGN3-201ENST00000275036 DENND4CQ5VZ89 1909 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 OR6C75A6NL08 312 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 CYB561D2O14569 222 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 CLIC2O15247 247 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 ITGB3P05106 788 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 PTPN2P17706 415 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 PAX3P23760 479 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 FCARP24071 287 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 POLR2BP30876 1174 aaKnown RBP15.57■□□□□ 0.08
HMGN3-201ENST00000275036 CDR1P51861 262 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms