RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 NFIAQ12857 509 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 PDIA2Q13087 525 aaKnown RBP13.54□□□□□ -0.24
HERC6-202ENST00000273960 TTLL12Q14166 644 aaPredicted RBP13.54□□□□□ -0.24
HERC6-202ENST00000273960 Q4G0T1 1027 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 GSTCDQ8NEC7 633 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 NAT14Q8WUY8 206 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 SUDS3Q9H7L9 328 aaPredicted RBP13.54□□□□□ -0.24
HERC6-202ENST00000273960 KANSL3Q9P2N6 904 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 COL4A1P02462 1669 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 NCANO14594 1321 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 CLRN2A0PK11 232 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 USP17L10C9JJH3 530 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 KRT5P13647 590 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 SSTR1P30872 391 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 GAD2Q05329 585 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 CDC16Q13042 620 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 NCOA4Q13772 614 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 C1QTNF12Q5T7M4 302 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 ZBTB46Q86UZ6 589 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 ZSWIM2Q8NEG5 633 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 SHANK3Q9BYB0 1731 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 FHDC1Q9C0D6 1143 aaPredicted RBP13.54□□□□□ -0.24
HERC6-202ENST00000273960 APEX2Q9UBZ4 518 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 TRAF3IP3Q9Y228 551 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 FRMD4BQ9Y2L6 1034 aa13.54□□□□□ -0.24
HERC6-202ENST00000273960 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 BOLA2-SMG1P6H3BVE0 249 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 FCHO1O14526 889 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 EYA4O95677 639 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 ITGA2BP08514 1039 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 IMPDH2P12268 514 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 SIX1Q15475 284 aaPredicted RBP13.53□□□□□ -0.24
HERC6-202ENST00000273960 PDK4Q16654 411 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 IYDQ6PHW0 289 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 RBM44Q6ZP01 1051 aaKnown RBP13.53□□□□□ -0.24
HERC6-202ENST00000273960 ARHGAP27Q6ZUM4 889 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 CYP2W1Q8TAV3 490 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 DHX38Q92620 1227 aaKnown RBP13.53□□□□□ -0.24
HERC6-202ENST00000273960 DTNBP1Q96EV8 351 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 TRAIPQ9BWF2 469 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 TSSK1BQ9BXA7 367 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 TSPYL2Q9H2G4 693 aaPredicted RBP13.53□□□□□ -0.24
HERC6-202ENST00000273960 RMI1Q9H9A7 625 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 STX18Q9P2W9 335 aaKnown RBP13.53□□□□□ -0.24
HERC6-202ENST00000273960 ABCA3Q99758 1704 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 EMSYQ7Z589 1322 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 HSPA6P17066 643 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 MAPK4P31152 587 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 ABCD1P33897 745 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 SHROOM1Q2M3G4 852 aaPredicted RBP13.53□□□□□ -0.24
HERC6-202ENST00000273960 C6orf163Q5TEZ5 329 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 GCNAQ96QF7 691 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 RTFDC1Q9BY42 306 aaPredicted RBP13.53□□□□□ -0.24
HERC6-202ENST00000273960 GRIP2Q9C0E4 1043 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 METTL14Q9HCE5 456 aaKnown RBP13.53□□□□□ -0.24
HERC6-202ENST00000273960 TYW1Q9NV66 732 aaKnown RBP13.53□□□□□ -0.24
HERC6-202ENST00000273960 LARSQ9P2J5 1176 aaKnown RBP13.53□□□□□ -0.24
HERC6-202ENST00000273960 APPL1Q9UKG1 709 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 ANGPTL2Q9UKU9 493 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 NEU2Q9Y3R4 380 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 CCDC88AQ3V6T2 1871 aa13.53□□□□□ -0.24
HERC6-202ENST00000273960 COL16A1Q07092 1604 aaPredicted RBP13.52□□□□□ -0.24
HERC6-202ENST00000273960 PCP11498 1178 aaKnown RBP13.52□□□□□ -0.24
HERC6-202ENST00000273960 ARL4CP56559 192 aa13.52□□□□□ -0.24
HERC6-202ENST00000273960 DLG1Q12959 904 aa13.52□□□□□ -0.24
HERC6-202ENST00000273960 PEX6Q13608 980 aa13.52□□□□□ -0.24
HERC6-202ENST00000273960 MMEL1Q495T6 779 aa13.52□□□□□ -0.24
HERC6-202ENST00000273960 ATP13A4Q4VNC1 1196 aa13.52□□□□□ -0.24
HERC6-202ENST00000273960 NLGN1Q8N2Q7 840 aa13.52□□□□□ -0.24
HERC6-202ENST00000273960 TEKT1Q969V4 418 aa13.52□□□□□ -0.24
HERC6-202ENST00000273960 FAM111AQ96PZ2 611 aa13.52□□□□□ -0.24
HERC6-202ENST00000273960 GPR88Q9GZN0 384 aa13.52□□□□□ -0.24
HERC6-202ENST00000273960 TMEM117Q9H0C3 514 aa13.52□□□□□ -0.24
HERC6-202ENST00000273960 TGFB1I1O43294 461 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 OATP04181 439 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 CDK7P50613 346 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 MARSP56192 900 aaKnown RBP13.52□□□□□ -0.25
HERC6-202ENST00000273960 DYNLT1P63172 113 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 GPS1Q13098 491 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 MED21Q13503 144 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 PABPC1LQ4VXU2 614 aaKnown RBP13.52□□□□□ -0.25
HERC6-202ENST00000273960 SLC45A4Q5BKX6 768 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 NOP9Q86U38 636 aaKnown RBP13.52□□□□□ -0.25
HERC6-202ENST00000273960 PASD1Q8IV76 773 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 RBM15BQ8NDT2 890 aaKnown RBP13.52□□□□□ -0.25
HERC6-202ENST00000273960 OLIG1Q8TAK6 271 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 MTBPQ96DY7 904 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 HSPBAP1Q96EW2 488 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 MECRQ9BV79 373 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 SERPINB13Q9UIV8 391 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 ADGRA3Q8IWK6 1321 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 H0YIN7 160 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 COQ9O75208 318 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 RAD17O75943 681 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 ALAS1P13196 640 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 ZNF76P36508 570 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 SLC12A3P55017 1021 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 AQP4P55087 323 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 ASPHQ12797 758 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 MPP3Q13368 585 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms