RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 FESP07332 822 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 PPP2R5CQ13362 524 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 MTMR2Q13614 643 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 NFIL3Q16649 462 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 LRRC36Q1X8D7 754 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 RINLQ6ZS11 566 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 PDCD7Q8N8D1 485 aaKnown RBP13.64□□□□□ -0.23
COL8A1-202ENST00000273342 FBXL13Q8NEE6 735 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 SLCO2A1Q92959 643 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 HOMER2Q9NSB8 354 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 KANSL3Q9P2N6 904 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 STOML1Q9UBI4 398 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 PIK3CDO00329 1044 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 HAUS5O94927 633 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 RPL7AP62424 266 aaKnown RBP13.64□□□□□ -0.23
COL8A1-202ENST00000273342 SP4Q02446 784 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 CAV1Q03135 178 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 TXNRD3NBQ6F5E7 133 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 SLC9A9Q8IVB4 645 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 SLC25A41Q8N5S1 370 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 STMN2Q93045 179 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 CLPTM1LQ96KA5 538 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 TMEM206Q9H813 350 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 ETAA1Q9NY74 926 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 AHCYL1O43865 530 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 TCEA3O75764 348 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 BAG2O95816 211 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 CNGA1P29973 690 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 DSG3P32926 999 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 VHLP40337 213 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 SERPINB4P48594 390 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 NEK3P51956 506 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 FOXB2Q5VYV0 432 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 ISLR2Q6UXK2 745 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 ZCCHC9Q8N567 271 aaKnown RBP13.63□□□□□ -0.23
COL8A1-202ENST00000273342 TRIM4Q9C037 500 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 SCOCQ9UIL1 159 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 TLR3O15455 904 aaKnown RBP13.63□□□□□ -0.23
COL8A1-202ENST00000273342 TROVE2P10155 538 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL8A1-202ENST00000273342 KITP10721 976 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 AMPD1P23109 780 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 CACNA2D1P54289 1103 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 KLF1Q13351 362 aaPredicted RBP13.63□□□□□ -0.23
COL8A1-202ENST00000273342 CCNG2Q16589 344 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 MFSD7Q6UXD7 560 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 FBXO27Q8NI29 283 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 FAM213AQ9BRX8 229 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 MOV10L1Q9BXT6 1211 aaKnown RBP13.63□□□□□ -0.23
COL8A1-202ENST00000273342 PI4KBQ9UBF8 816 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 FAM198AQ9UFP1 575 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 STK24Q9Y6E0 443 aa13.63□□□□□ -0.23
COL8A1-202ENST00000273342 GSC2O15499 205 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 ITGB5P18084 799 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 KLRC2P26717 231 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 MAN1A1P33908 653 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 STAT2P52630 851 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 WASHC2DQ5SRD0 308 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 CWF19L1Q69YN2 538 aaKnown RBP13.62□□□□□ -0.23
COL8A1-202ENST00000273342 C15orf52Q6ZUT6 534 aaKnown RBP13.62□□□□□ -0.23
COL8A1-202ENST00000273342 KBTBD2Q8IY47 623 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 IL31RAQ8NI17 732 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 FAM161BQ96MY7 647 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 TTC1Q99614 292 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 VCXQ9H320 206 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 TDRD3Q9H7E2 651 aaKnown RBP13.62□□□□□ -0.23
COL8A1-202ENST00000273342 MARCOQ9UEW3 520 aaPredicted RBP13.62□□□□□ -0.23
COL8A1-202ENST00000273342 SPATA31A6Q5VVP1 1343 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 KAT6AQ92794 2004 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 KRT1P04264 644 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 ESRRAP11474 423 aaPredicted RBP13.62□□□□□ -0.23
COL8A1-202ENST00000273342 ACADSP16219 412 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 RARRES1P49788 294 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 NFX1Q12986 1120 aaKnown RBP13.62□□□□□ -0.23
COL8A1-202ENST00000273342 UGCGQ16739 394 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 CTC1Q2NKJ3 1217 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 MSS51Q4VC12 460 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 LRRC74BQ6ZQY2 392 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 RHOT1Q8IXI2 618 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 ENDOVQ8N8Q3 282 aaKnown RBP13.62□□□□□ -0.23
COL8A1-202ENST00000273342 MAIP1Q8WWC4 291 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 STRA6Q9BX79 667 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 ANKFY1Q9P2R3 1169 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 SBF2Q86WG5 1849 aa13.62□□□□□ -0.23
COL8A1-202ENST00000273342 DENND3A2RUS2 1198 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 PROSCO94903 275 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 ETS2P15036 469 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 ARFIP2P53365 341 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 KDSRQ06136 332 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 ALCAMQ13740 583 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 TCEAL1Q15170 157 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 BBS9Q3SYG4 887 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 ZNF394Q53GI3 561 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 XKR9Q5GH70 373 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 C3orf62Q6ZUJ4 267 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 SYDE1Q6ZW31 735 aaPredicted RBP13.61□□□□□ -0.23
COL8A1-202ENST00000273342 ALYREFQ86V81 257 aaKnown RBP13.61□□□□□ -0.23
COL8A1-202ENST00000273342 RHPN2Q8IUC4 686 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 FBXO41Q8TF61 875 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 BICD1Q96G01 975 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 FGD4Q96M96 766 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms