RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 NIFKQ9BYG3 293 aaKnown RBP9.31□□□□□ -0.92
TRIM43-201ENST00000272395 PPP1R12CQ9BZL4 782 aa9.31□□□□□ -0.92
TRIM43-201ENST00000272395 PABPC3Q9H361 631 aaKnown RBP9.31□□□□□ -0.92
TRIM43-201ENST00000272395 C17orf75Q9HAS0 396 aa9.31□□□□□ -0.92
TRIM43-201ENST00000272395 TMEM39AQ9NV64 488 aa9.31□□□□□ -0.92
TRIM43-201ENST00000272395 TAS2R14Q9NYV8 317 aa9.31□□□□□ -0.92
TRIM43-201ENST00000272395 UVRAGQ9P2Y5 699 aa9.31□□□□□ -0.92
TRIM43-201ENST00000272395 NOCTQ9UK39 431 aaKnown RBP9.31□□□□□ -0.92
TRIM43-201ENST00000272395 MTUS1Q9ULD2 1270 aa9.31□□□□□ -0.92
TRIM43-201ENST00000272395 MBLAC1A4D2B0 266 aaPredicted RBP9.3□□□□□ -0.92
TRIM43-201ENST00000272395 CCDC169A6NNP5 214 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 KIAA0391O15091 583 aaKnown RBP9.3□□□□□ -0.92
TRIM43-201ENST00000272395 TRAPPC3O43617 180 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 LRRN2O75325 713 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 FSBPO95073 299 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 CYP1A2P05177 515 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 GNAT1P11488 350 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 GPC3P51654 580 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 CLCN3P51790 818 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 SMTNP53814 917 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 IFFO1Q0D2I5 559 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 PRPF4BQ13523 1007 aaKnown RBP9.3□□□□□ -0.92
TRIM43-201ENST00000272395 BYSLQ13895 437 aaKnown RBP9.3□□□□□ -0.92
TRIM43-201ENST00000272395 PTPROQ16827 1216 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 KRT71Q3SY84 523 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 ODF2Q5BJF6 829 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 XKR9Q5GH70 373 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 SEL1L2Q5TEA6 688 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 ENOSF1Q7L5Y1 443 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 SERINC5Q86VE9 423 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 PALB2Q86YC2 1186 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 JAMLQ86YT9 394 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 ARHGEF19Q8IW93 802 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 RPUSD2Q8IZ73 545 aaKnown RBP9.3□□□□□ -0.92
TRIM43-201ENST00000272395 LRRC71Q8N4P6 559 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 RDH13Q8NBN7 331 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 EPS8L1Q8TE68 723 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 SLC20A1Q8WUM9 679 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 ALG3Q92685 438 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 P3H4Q92791 437 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 KIFAP3Q92845 792 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 TLCD1Q96CP7 247 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 TOX2Q96NM4 488 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 CEP89Q96ST8 783 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 PPP1R16BQ96T49 567 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 CBWD1Q9BRT8 395 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 TMEM109Q9BVC6 243 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 CELF4Q9BZC1 486 aaKnown RBP9.3□□□□□ -0.92
TRIM43-201ENST00000272395 FAM49AQ9H0Q0 323 aaPredicted RBP9.3□□□□□ -0.92
TRIM43-201ENST00000272395 STMN4Q9H169 189 aaPredicted RBP9.3□□□□□ -0.92
TRIM43-201ENST00000272395 CENPHQ9H3R5 247 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 CYP26B1Q9NR63 512 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 MTRF1LQ9UGC7 380 aaKnown RBP9.3□□□□□ -0.92
TRIM43-201ENST00000272395 GTF3C4Q9UKN8 822 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 TBX21Q9UL17 535 aa9.3□□□□□ -0.92
TRIM43-201ENST00000272395 RRN3P2A6NIE6 340 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 E7EVH7 732 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 DKC1O60832 514 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 CTSHP09668 335 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 CHRNB2P17787 502 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 SCP2P22307 547 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 HPDP32754 393 aaPredicted RBP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 CYP2C18P33260 490 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 FLT3P36888 993 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 THPOP40225 353 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 USP8P40818 1118 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 PTGIRP43119 386 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 GCLMP48507 274 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 FNTAP49354 379 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 PEX5P50542 639 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 PMS2P54278 862 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 DLG4P78352 724 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 TMEM62Q0P6H9 643 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 PTK7Q13308 1070 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 SLMAPQ14BN4 828 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 TRIM71Q2Q1W2 868 aaKnown RBP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 DENND2CQ68D51 928 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 KRT39Q6A163 491 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 PACS2Q86VP3 889 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 MICALL1Q8N3F8 863 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 C12orf50Q8NA57 414 aaPredicted RBP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 DNAJB3Q8WWF6 145 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 SPIRE2Q8WWL2 714 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 SLCO2A1Q92959 643 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 CD101Q93033 1021 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 ZNF668Q96K58 619 aaPredicted RBP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 FBXL18Q96ME1 805 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 NTPCRQ9BSD7 190 aaKnown RBP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 TRIM51Q9BSJ1 452 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 SEZ6LQ9BYH1 1024 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 TMEM117Q9H0C3 514 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 DPH5Q9H2P9 285 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 HIPK3Q9H422 1215 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 PCIF1Q9H4Z3 704 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 TMEM8AQ9HCN3 771 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 KCNG1Q9UIX4 513 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 NR2E1Q9Y466 385 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 PCDHA3Q9Y5H8 950 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 SIP14410 1827 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 COL1A2P08123 1366 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms