RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 KLK14Q9P0G3 267 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 CILPO75339 1184 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 CTSHP09668 335 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 PHLDB2Q86SQ0 1253 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 SYCE1Q8N0S2 351 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 SLC4A11Q8NBS3 891 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 ZNF564Q8TBZ8 553 aaPredicted RBP12.93□□□□□ -0.34
SDE2-201ENST00000272091 PXYLP1Q8TE99 480 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 CNOT8Q9UFF9 292 aaKnown RBP12.93□□□□□ -0.34
SDE2-201ENST00000272091 CES2O00748 559 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
SDE2-201ENST00000272091 RRM1P23921 792 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 TRIM71Q2Q1W2 868 aaKnown RBP12.92□□□□□ -0.34
SDE2-201ENST00000272091 LHX8Q68G74 356 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 PHF13Q86YI8 300 aaPredicted RBP12.92□□□□□ -0.34
SDE2-201ENST00000272091 SPATA4Q8NEY3 305 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 CD101Q93033 1021 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 ZMYND15Q9H091 742 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 MEIS3P2A8K0S8 358 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 KCNK3O14649 394 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 RHOXF2BP0C7M4 288 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 CLCN6P51797 869 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 ITIH3Q06033 890 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 SOX4Q06945 474 aaPredicted RBP12.92□□□□□ -0.34
SDE2-201ENST00000272091 CAGE1Q8TC20 777 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 ZNF296Q8WUU4 475 aaPredicted RBP12.92□□□□□ -0.34
SDE2-201ENST00000272091 RHOXF2Q9BQY4 288 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 ALG6Q9Y672 507 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 MARCKSL1P49006 195 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 RBP5P82980 135 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 TRIM72Q6ZMU5 477 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 AGO3Q9H9G7 860 aaKnown RBP12.92□□□□□ -0.34
SDE2-201ENST00000272091 AVENQ9NQS1 362 aaPredicted RBP12.92□□□□□ -0.34
SDE2-201ENST00000272091 RBM12Q9NTZ6 932 aaKnown RBP12.92□□□□□ -0.34
SDE2-201ENST00000272091 CYTH4Q9UIA0 394 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 PCDHGC3Q9UN70 934 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 ST3GAL5Q9UNP4 418 aa12.92□□□□□ -0.34
SDE2-201ENST00000272091 SMIM28A0A1B0GU29 152 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 INHAP05111 366 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 CDH5P33151 784 aaPredicted RBP12.91□□□□□ -0.34
SDE2-201ENST00000272091 INCA1Q0VD86 236 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
SDE2-201ENST00000272091 ALG3Q92685 438 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 TRMT13Q9NUP7 481 aaKnown RBP12.91□□□□□ -0.34
SDE2-201ENST00000272091 AMFRQ9UKV5 643 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 TCRBV5S1A1TA0A578 114 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 HOXD10P28358 340 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 ACLYP53396 1101 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 PTGISQ16647 500 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 SMYD5Q6GMV2 418 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 RASGEF1CQ8N431 466 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 MMGT1Q8N4V1 131 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 RAET1EQ8TD07 263 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 C11orf70Q9BRQ4 267 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 TRIM6Q9C030 488 aaPredicted RBP12.91□□□□□ -0.34
SDE2-201ENST00000272091 UVRAGQ9P2Y5 699 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 TMEM59LQ9UK28 342 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 KCNE1P15382 129 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 COMTP21964 271 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 YARSP54577 528 aaKnown RBP12.91□□□□□ -0.34
SDE2-201ENST00000272091 C9orf57Q5W0N0 161 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 DENND1BQ6P3S1 775 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 MMS22LQ6ZRQ5 1243 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 C1orf131Q8NDD1 294 aaKnown RBP12.91□□□□□ -0.34
SDE2-201ENST00000272091 KRT35Q92764 455 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 RPGRIP1Q96KN7 1286 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
SDE2-201ENST00000272091 RAB21Q9UL25 225 aa12.91□□□□□ -0.34
SDE2-201ENST00000272091 TMEM110-MUSTN1A8MSY1 372 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 PTGESO14684 152 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 GJB6O95452 261 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 CYP3A5P20815 502 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 NSFP46459 744 aaKnown RBP12.9□□□□□ -0.34
SDE2-201ENST00000272091 MESDQ14696 234 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 PDCL2Q8N4E4 241 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 CYP3A43Q9HB55 503 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 GOLGA2P5Q9HBQ8 144 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 CEP350Q5VT06 3117 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 RNASE9P60153 205 aaKnown RBP12.9□□□□□ -0.34
SDE2-201ENST00000272091 ITGA7Q13683 1181 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 USP38Q8NB14 1042 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 PIRO00625 290 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 SPTLC1O15269 473 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 MGEA5O60502 916 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 MMP8P22894 467 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 IGFBP6P24592 240 aaPredicted RBP12.9□□□□□ -0.34
SDE2-201ENST00000272091 PLEKHA7Q6IQ23 1121 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 PCSK9Q8NBP7 692 aaKnown RBP12.9□□□□□ -0.34
SDE2-201ENST00000272091 GSTCDQ8NEC7 633 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 PBKQ96KB5 322 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 CALR3Q96L12 384 aaKnown RBP12.9□□□□□ -0.34
SDE2-201ENST00000272091 MRPL45Q9BRJ2 306 aaKnown RBP12.9□□□□□ -0.34
SDE2-201ENST00000272091 ERVK-5Q9HDB9 667 aa12.9□□□□□ -0.34
SDE2-201ENST00000272091 RPS6KA5O75582 802 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 GNRH1P01148 92 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 PAEPP09466 180 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 MYBL1P10243 752 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 THPOP40225 353 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 PEX5P50542 639 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms