RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 GINS2Q9Y248 185 aa17.7■□□□□ 0.42
CCDC40-201ENST00000269318 MYO1FO00160 1098 aa17.69■□□□□ 0.42
CCDC40-201ENST00000269318 SND1Q7KZF4 910 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCDC40-201ENST00000269318 CD302Q8IX05 232 aa17.69■□□□□ 0.42
CCDC40-201ENST00000269318 WDTC1Q8N5D0 677 aa17.69■□□□□ 0.42
CCDC40-201ENST00000269318 EIF1ADQ8N9N8 165 aaKnown RBP17.69■□□□□ 0.42
CCDC40-201ENST00000269318 ZNF518BQ9C0D4 1074 aa17.69■□□□□ 0.42
CCDC40-201ENST00000269318 SMYD3Q9H7B4 428 aa17.69■□□□□ 0.42
CCDC40-201ENST00000269318 MRPL47Q9HD33 250 aaKnown RBP17.69■□□□□ 0.42
CCDC40-201ENST00000269318 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
CCDC40-201ENST00000269318 NFU1Q9UMS0 254 aa17.69■□□□□ 0.42
CCDC40-201ENST00000269318 SCINQ9Y6U3 715 aa17.69■□□□□ 0.42
CCDC40-201ENST00000269318 A0A0U1RQG5 324 aaPredicted RBP17.68■□□□□ 0.42
CCDC40-201ENST00000269318 PROSCO94903 275 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 NPTXRO95502 500 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 STAU1O95793 577 aaKnown RBP17.68■□□□□ 0.42
CCDC40-201ENST00000269318 MYL3P08590 195 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 HSPA6P17066 643 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 EIF4BP23588 611 aaKnown RBP17.68■□□□□ 0.42
CCDC40-201ENST00000269318 POLR2BP30876 1174 aaKnown RBP17.68■□□□□ 0.42
CCDC40-201ENST00000269318 HOXC8P31273 242 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 AARSP49588 968 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC40-201ENST00000269318 GUCY2FP51841 1108 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 RAD23BP54727 409 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 CDH8P55286 799 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 RWDD2BP57060 319 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 PAK2Q13177 524 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 NNTQ13423 1086 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 PPP2R5EQ16537 467 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 SEL1L2Q5TEA6 688 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 SLC27A1Q6PCB7 646 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 CATSPER4Q7RTX7 472 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 ADAT2Q7Z6V5 191 aaKnown RBP17.68■□□□□ 0.42
CCDC40-201ENST00000269318 ZDHHC14Q8IZN3 488 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 TMEM35BQ8NCS4 154 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 C1orf131Q8NDD1 294 aaKnown RBP17.68■□□□□ 0.42
CCDC40-201ENST00000269318 WHAMMQ8TF30 809 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 CCDC102AQ96A19 550 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 GOLGA6L10A0A0M3HER8 536 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 TCRBV5S1A1TA0A578 114 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 TREHO43280 583 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 PAEPP09466 180 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 ECHS1P30084 290 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 TM4SF4P48230 202 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 MAATS1Q7Z4T9 603 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 TRPV1Q8NER1 839 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 CCDC26Q8TAB7 109 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 DNAJB3Q8WWF6 145 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 IFT81Q8WYA0 676 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 SEC14L1Q92503 715 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 HPDLQ96IR7 371 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 ZIC5Q96T25 663 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 EIF2AQ9BY44 585 aaKnown RBP17.68■□□□□ 0.42
CCDC40-201ENST00000269318 CXCL16Q9H2A7 254 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 PLEKHA5Q9HAU0 1116 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 CYP3A43Q9HB55 503 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 PARVAQ9NVD7 372 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 DPP3Q9NY33 737 aa17.68■□□□□ 0.42
CCDC40-201ENST00000269318 TTI1O43156 1089 aa17.67■□□□□ 0.42
CCDC40-201ENST00000269318 CILPO75339 1184 aa17.67■□□□□ 0.42
CCDC40-201ENST00000269318 AKR1A1P14550 325 aa17.67■□□□□ 0.42
CCDC40-201ENST00000269318 LACTBP83111 547 aaPredicted RBP17.67■□□□□ 0.42
CCDC40-201ENST00000269318 ZNF200P98182 395 aaPredicted RBP17.67■□□□□ 0.42
CCDC40-201ENST00000269318 PURAQ00577 322 aaKnown RBP17.67■□□□□ 0.42
CCDC40-201ENST00000269318 GPS2Q13227 327 aa17.67■□□□□ 0.42
CCDC40-201ENST00000269318 FSCN1Q16658 493 aaKnown RBP17.67■□□□□ 0.42
CCDC40-201ENST00000269318 NOTUMQ6P988 496 aa17.67■□□□□ 0.42
CCDC40-201ENST00000269318 APBB1IPQ7Z5R6 666 aaPredicted RBP17.67■□□□□ 0.42
CCDC40-201ENST00000269318 SLC13A5Q86YT5 568 aaPredicted RBP17.67■□□□□ 0.42
CCDC40-201ENST00000269318 PRELID2Q8N945 189 aa17.67■□□□□ 0.42
CCDC40-201ENST00000269318 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCDC40-201ENST00000269318 TWNKQ96RR1 684 aa17.67■□□□□ 0.42
CCDC40-201ENST00000269318 KATNAL1Q9BW62 490 aa17.67■□□□□ 0.42
CCDC40-201ENST00000269318 ACBD3Q9H3P7 528 aa17.67■□□□□ 0.42
CCDC40-201ENST00000269318 AGAP1Q9UPQ3 857 aa17.67■□□□□ 0.42
CCDC40-201ENST00000269318 PCNTO95613 3336 aa17.67■□□□□ 0.42
CCDC40-201ENST00000269318 RALGAPA2Q2PPJ7 1873 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 CA12O43570 354 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 CALB1P05937 261 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 FAM153BP0C7A2 387 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 RBP5P82980 135 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 GABPB1Q06547 395 aaPredicted RBP17.66■□□□□ 0.42
CCDC40-201ENST00000269318 CUL1Q13616 776 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 FAM153CQ494X1 144 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 SLC4A11Q8NBS3 891 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 FEZF2Q8TBJ5 459 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 TMEM40Q8WWA1 233 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 KIF12Q96FN5 646 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 SNX27Q96L92 541 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 CELF4Q9BZC1 486 aaKnown RBP17.66■□□□□ 0.42
CCDC40-201ENST00000269318 LHX5Q9H2C1 402 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.66■□□□□ 0.42
CCDC40-201ENST00000269318 SNTG2Q9NY99 539 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 HMGXB4Q9UGU5 601 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 FAM153AQ9UHL3 310 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 DERAQ9Y315 318 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 CITO14578 2027 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 PHF2O75151 1096 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 SNX17Q15036 470 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 SIX1Q15475 284 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms