RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 AGPSO00116 658 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 GNGT2O14610 69 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 RIPK2O43353 540 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 TCN1P20061 433 aaPredicted RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 RFC5P40937 340 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 EIF3EP60228 445 aaKnown RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 KCNA1Q09470 495 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 THEMIS2Q5TEJ8 643 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 AADACL2Q6P093 401 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 SYDE1Q6ZW31 735 aaPredicted RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 EXOC8Q8IYI6 725 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 IQCKQ8N0W5 287 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 ZDHHC15Q96MV8 337 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 MED15Q96RN5 788 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 ACAD9Q9H845 621 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 CTNNAL1Q9UBT7 734 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 NAALADL1Q9UQQ1 740 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 SH3BP5O60239 455 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 CASP5P51878 434 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 CDH6P55285 790 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 BCAR1P56945 870 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 RPS6P62753 249 aaKnown RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 SNX30Q5VWJ9 437 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 BTNL9Q6UXG8 535 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 HAS1Q92839 578 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 NMD3Q96D46 503 aaKnown RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 OLFML3Q9NRN5 406 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 TRIM33Q9UPN9 1127 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 PIK3R2O00459 728 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 ENO3P13929 434 aaPredicted RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 FNTAP49354 379 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 GPC3P51654 580 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 CACNA2D1P54289 1103 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 STX3Q13277 289 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 SMTNL2Q2TAL5 461 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 ISLR2Q6UXK2 745 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 OR6B3Q8NGW1 331 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 SPIRE2Q8WWL2 714 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 BAP1Q92560 729 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 DNAJC19Q96DA6 116 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 SNX25Q9H3E2 840 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 ASNSD1Q9NWL6 643 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 GTSE1Q9NYZ3 720 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 GTPBP10A4D1E9 387 aaKnown RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 M0QYV0 167 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 O00370 1275 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 AIM2O14862 343 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 RHBDL3P58872 404 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 ZBTB17Q13105 803 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 NCOA4Q13772 614 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 DNAL1Q4LDG9 190 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 XKR3Q5GH77 459 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 FAM102AQ5T9C2 384 aaPredicted RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 FAM163AQ96GL9 167 aaPredicted RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 TAAR1Q96RJ0 339 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 MRPL4Q9BYD3 311 aaKnown RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 RAB6BQ9NRW1 208 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 MTO1Q9Y2Z2 717 aaKnown RBP12.13□□□□□ -0.47
VPS33A-201ENST00000267199 LTN1O94822 1766 aa12.13□□□□□ -0.47
VPS33A-201ENST00000267199 M0QZ92 97 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 XPO1O14980 1071 aaKnown RBP12.12□□□□□ -0.47
VPS33A-201ENST00000267199 FGRP09769 529 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 KRT3P12035 628 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 ROR1Q01973 937 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 PRPSAP1Q14558 356 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 WDR72Q3MJ13 1102 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 BZW1Q7L1Q6 419 aaKnown RBP12.12□□□□□ -0.47
VPS33A-201ENST00000267199 SLC25A41Q8N5S1 370 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 RNF149Q8NC42 400 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 XPO7Q9UIA9 1087 aaKnown RBP12.12□□□□□ -0.47
VPS33A-201ENST00000267199 A0A0A6YYK5 440 aaPredicted RBP12.12□□□□□ -0.47
VPS33A-201ENST00000267199 ZBTB39O15060 712 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 CIITAP33076 1130 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 SESN2P58004 480 aaPredicted RBP12.12□□□□□ -0.47
VPS33A-201ENST00000267199 Q4G0T1 1027 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 DALRD3Q5D0E6 543 aaKnown RBP12.12□□□□□ -0.47
VPS33A-201ENST00000267199 IZUMO2Q6UXV1 221 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 FAM167AQ96KS9 214 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 LRRC4Q9HBW1 653 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 FNDC3AQ9Y2H6 1198 aaKnown RBP12.12□□□□□ -0.47
VPS33A-201ENST00000267199 PCDHGC5Q9Y5F6 944 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 SLIT3O75094 1523 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 EML1O00423 815 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 FAM47CQ5HY64 1035 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 ACAD11Q709F0 780 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 DPP9Q86TI2 863 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 LPAR1Q92633 364 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 THAP11Q96EK4 314 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 DTNBP1Q96EV8 351 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 GMCL1Q96IK5 515 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 MCEEQ96PE7 176 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 POP1Q99575 1024 aaKnown RBP12.12□□□□□ -0.47
VPS33A-201ENST00000267199 SH3GL2Q99962 352 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 SENP7Q9BQF6 1050 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 FAM49AQ9H0Q0 323 aaPredicted RBP12.12□□□□□ -0.47
VPS33A-201ENST00000267199 PDP2Q9P2J9 529 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 FMN2Q9NZ56 1722 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms