RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 SPATA31A6Q5VVP1 1343 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 SCN9AQ15858 1988 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 WDR64B1ANS9 1081 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 ENTPD3O75355 529 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 YY1P25490 414 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 SLC1A1P43005 524 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 ZBTB41Q5SVQ8 909 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 RNF43Q68DV7 783 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 APBB1IPQ7Z5R6 666 aaPredicted RBP13.09□□□□□ -0.31
CHMP3-201ENST00000263856 MAP4K3Q8IVH8 894 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 BBOF1Q8ND07 529 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 DTX3LQ8TDB6 740 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 C7orf43Q8WVR3 580 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 NAF1Q96HR8 494 aaKnown RBP13.09□□□□□ -0.31
CHMP3-201ENST00000263856 SLC5A4Q9NY91 659 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 ATP2A1O14983 1001 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 CAP2P40123 477 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 CPA2P48052 419 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 NRLP54845 237 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 NCKAP1LP55160 1127 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 CENPCQ03188 943 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 MAMLD1Q13495 774 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 TFDP1Q14186 410 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 MUM1Q2TAK8 710 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 MDH1BQ5I0G3 518 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 SYDE1Q6ZW31 735 aaPredicted RBP13.09□□□□□ -0.31
CHMP3-201ENST00000263856 RHPN2Q8IUC4 686 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 OGFOD1Q8N543 542 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 RBBP8NLQ8NC74 664 aaPredicted RBP13.09□□□□□ -0.31
CHMP3-201ENST00000263856 FAM13CQ8NE31 585 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 ZNF668Q96K58 619 aaPredicted RBP13.09□□□□□ -0.31
CHMP3-201ENST00000263856 TCHPQ9BT92 498 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 MAK16Q9BXY0 300 aaKnown RBP13.09□□□□□ -0.31
CHMP3-201ENST00000263856 PPP1R12CQ9BZL4 782 aa13.09□□□□□ -0.31
CHMP3-201ENST00000263856 H0YIN7 160 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 MUTP22033 750 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 FYB2Q5VWT5 728 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 TDRD10Q5VZ19 366 aaKnown RBP13.08□□□□□ -0.32
CHMP3-201ENST00000263856 B3GNT9Q6UX72 402 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 ASRGL1Q7L266 308 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 NLRP9Q7RTR0 991 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 FAM160B2Q86V87 743 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 CCDC125Q86Z20 511 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.32
CHMP3-201ENST00000263856 MRPL47Q9HD33 250 aaKnown RBP13.08□□□□□ -0.32
CHMP3-201ENST00000263856 HERC5Q9UII4 1024 aaKnown RBP13.08□□□□□ -0.32
CHMP3-201ENST00000263856 FEM1BQ9UK73 627 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 ASMTLO95671 621 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 PSEN1P49768 467 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 BASP1P80723 227 aaKnown RBP13.08□□□□□ -0.32
CHMP3-201ENST00000263856 C12orf56Q8IXR9 622 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 SCYL3Q8IZE3 742 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 PYROXD1Q8WU10 500 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 POLR3FQ9H1D9 316 aaPredicted RBP13.08□□□□□ -0.32
CHMP3-201ENST00000263856 PTPRJQ12913 1337 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 DNALI1O14645 258 aaPredicted RBP13.08□□□□□ -0.32
CHMP3-201ENST00000263856 BRD2P25440 801 aaKnown RBP13.08□□□□□ -0.32
CHMP3-201ENST00000263856 SLC8A3P57103 927 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 ZNF568Q3ZCX4 644 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 CENPUQ71F23 418 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 OTOAQ7RTW8 1153 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 ZBTB33Q86T24 672 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 NLGN1Q8N2Q7 840 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 ZCCHC9Q8N567 271 aaKnown RBP13.08□□□□□ -0.32
CHMP3-201ENST00000263856 MAML1Q92585 1016 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 SLCO2A1Q92959 643 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 GRAMD1AQ96CP6 724 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 ZNF70Q9UC06 446 aaPredicted RBP13.08□□□□□ -0.32
CHMP3-201ENST00000263856 PCSK1NQ9UHG2 260 aa13.08□□□□□ -0.32
CHMP3-201ENST00000263856 LIASO43766 372 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 ZBED4O75132 1171 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 DCTN3O75935 186 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 ICAM1P05362 532 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 KLF1Q13351 362 aaPredicted RBP13.07□□□□□ -0.32
CHMP3-201ENST00000263856 ORC1Q13415 861 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 PGM5Q15124 567 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 DNAJC24Q6P3W2 148 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 RFWD3Q6PCD5 774 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 MON1BQ7L1V2 547 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 PALM2Q8IXS6 379 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 RFWD2Q8NHY2 731 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 FEZF2Q8TBJ5 459 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 TRIM11Q96F44 468 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 TBC1D22BQ9NU19 505 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 RBAKQ9NYW8 714 aaPredicted RBP13.07□□□□□ -0.32
CHMP3-201ENST00000263856 LGALS13Q9UHV8 139 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 C10orf71Q711Q0 1435 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 YDJCA8MPS7 323 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 TJP3O95049 919 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 FGFR1P11362 822 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 ALADP13716 330 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 GM2AP17900 193 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 GCAP28676 217 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 GTF2H1P32780 548 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 TCEAL1Q15170 157 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 TEX2Q8IWB9 1127 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 FAM81BQ96LP2 452 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 SENP7Q9BQF6 1050 aa13.07□□□□□ -0.32
CHMP3-201ENST00000263856 AGO2Q9UKV8 859 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms