RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 TTC30AQ86WT1 665 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 ZNF677Q86XU0 584 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 DTX3LQ8TDB6 740 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 SYNDIG1LA6NDD5 238 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 CYLC2Q14093 348 aaPredicted RBP18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 PP2D1A8MPX8 630 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 RASSF9O75901 435 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 HIST1H2AGP0C0S8 130 aaPredicted RBP18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 HIST1H2ADP20671 130 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 CSTF3Q12996 717 aaKnown RBP18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 SLC30A5Q8TAD4 765 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 HIST1H2AHQ96KK5 128 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 HIST1H2AJQ99878 128 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 H2AFJQ9BTM1 129 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 TSR3Q9UJK0 312 aaKnown RBP18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 SPRP35270 261 aaPredicted RBP18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 MDH1BQ5I0G3 518 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 SPATA2LQ8IUW3 424 aaPredicted RBP18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 RBP5P82980 135 aa18.27■□□□□ 0.51
NOTCH3-201ENST00000263388 GTF2H3Q13889 308 aa18.27■□□□□ 0.51
NOTCH3-201ENST00000263388 ALG13Q9NP73 1137 aaKnown RBP18.27■□□□□ 0.51
NOTCH3-201ENST00000263388 PIM2Q9P1W9 311 aa18.27■□□□□ 0.51
NOTCH3-201ENST00000263388 INO80Q9ULG1 1556 aaPredicted RBP18.27■□□□□ 0.51
NOTCH3-201ENST00000263388 RGS4P49798 205 aa18.27■□□□□ 0.51
NOTCH3-201ENST00000263388 RBM46Q8TBY0 533 aaKnown RBP18.27■□□□□ 0.51
NOTCH3-201ENST00000263388 FRMD8Q9BZ67 464 aaPredicted RBP18.27■□□□□ 0.51
NOTCH3-201ENST00000263388 LZTS1Q9Y250 596 aa18.27■□□□□ 0.51
NOTCH3-201ENST00000263388 CLASP2O75122 1294 aaKnown RBP18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 MRPS35P82673 323 aaKnown RBP18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 WDR72Q3MJ13 1102 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 TASP1Q9H6P5 420 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 RHOBTB3O94955 611 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 SYTL3Q4VX76 610 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 CPA5Q8WXQ8 436 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 SYN2Q92777 582 aaPredicted RBP18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 VPS33BQ9H267 617 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 PIDD1Q9HB75 910 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 SLC7A5P2Q9GIP4 190 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 RSAD1Q9HA92 442 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 C20orf96Q9NUD7 363 aaPredicted RBP18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 ZFP42Q96MM3 310 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 OSBPL8Q9BZF1 889 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 GRID1Q9ULK0 1009 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 ALDH1A1P00352 501 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 EPHA7Q15375 998 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 EFL1Q7Z2Z2 1120 aaKnown RBP18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 AGBL1Q96MI9 1066 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 SCN3BQ9NY72 215 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 FAM107AO95990 144 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 ACADSBP45954 432 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 GALCP54803 685 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 PDK1Q15118 436 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 MFSD14CQ5VZR4 134 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 RNF149Q8NC42 400 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 ST13P5Q8NFI4 369 aaPredicted RBP18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 CPVLQ9H3G5 476 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 GOLPH3Q9H4A6 298 aa18.26■□□□□ 0.51
NOTCH3-201ENST00000263388 RSPH10B2B2RC85 870 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 PSMD14O00487 310 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 RSPH10BP0C881 870 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 RXRBP28702 533 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 COBLL1Q53SF7 1204 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 SHCBP1Q8NEM2 672 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 ELMO2Q96JJ3 720 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 NDEL1Q9GZM8 345 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 TDRD3Q9H7E2 651 aaKnown RBP18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 CATSPERBQ9H7T0 1116 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 PCMTD2Q9NV79 361 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 DBR1Q9UK59 544 aaKnown RBP18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 HOXD10P28358 340 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 LRRC36Q1X8D7 754 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 LPAR1Q92633 364 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 FAM162AQ96A26 154 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 LINC00523Q86TU6 105 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 AGAP3Q96P47 875 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 VPS9D1Q9Y2B5 631 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 CCT8L1PA6NM43 557 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 CD4P01730 458 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 SNRPAP09012 282 aaKnown RBP18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 TP53BP2Q13625 1128 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 APPL1Q9UKG1 709 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 FBXW10Q5XX13 1052 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 C17orf80Q9BSJ5 609 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 TMEM120BA0PK00 339 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 CPB1P15086 417 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 E4F1Q66K89 784 aaPredicted RBP18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 TRIM69Q86WT6 500 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 LRRIQ3A6PVS8 624 aaPredicted RBP18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 UBXN8O00124 270 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 CCNI2Q6ZMN8 369 aaPredicted RBP18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 TERB1Q8NA31 727 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 ERP27Q96DN0 273 aa18.25■□□□□ 0.51
NOTCH3-201ENST00000263388 RPS6KA4O75676 772 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 CYBBP04839 570 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 CLK1P49759 484 aaKnown RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 DSG1Q02413 1049 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 DNAJC9Q8WXX5 260 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 PKP3Q9Y446 797 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 MANSC1Q9H8J5 431 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms