RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.74□□□□□ -0.214e-8■■■■■ 48
SNX1-201ENST00000261889 KCNG1Q9UIX4 513 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 ZFP69BQ9UJL9 534 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.74□□□□□ -0.21
SNX1-201ENST00000261889 PTPRJQ12913 1337 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 LRRD1A4D1F6 860 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 CDH16O75309 829 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 ATP4AP20648 1035 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 GMPRP36959 345 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 NSFP46459 744 aaKnown RBP13.74□□□□□ -0.21
SNX1-201ENST00000261889 CDR2Q01850 454 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 AOC3Q16853 763 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 BBS9Q3SYG4 887 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 NLRP9Q7RTR0 991 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 NETO2Q8NC67 525 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 P3H4Q92791 437 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 RAVER2Q9HCJ3 691 aaKnown RBP13.74□□□□□ -0.21
SNX1-201ENST00000261889 GINM1Q9NU53 330 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 RAB20Q9NX57 234 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 ADGRA3Q8IWK6 1321 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 GRIN3BO60391 1043 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 TPBGLP0DKB5 382 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 ETS2P15036 469 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 YWHABP31946 246 aaKnown RBP13.74□□□□□ -0.21
SNX1-201ENST00000261889 POLGP54098 1239 aaPredicted RBP13.74□□□□□ -0.21
SNX1-201ENST00000261889 MFAP3P55082 362 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 EML3Q32P44 896 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 TNFAIP8L3Q5GJ75 292 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 MFSD5Q6N075 450 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 CCNJLQ8IV13 435 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 DDX27Q96GQ7 796 aaKnown RBP13.74□□□□□ -0.21
SNX1-201ENST00000261889 MAGEB18Q96M61 343 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 TRAIPQ9BWF2 469 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 LRRC19Q9H756 370 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 ZFATQ9P243 1243 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 PACSIN3Q9UKS6 424 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 IVNS1ABPQ9Y6Y0 642 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 TLR3O15455 904 aaKnown RBP13.73□□□□□ -0.21
SNX1-201ENST00000261889 SERPINB3P29508 390 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 SPARCL1Q14515 664 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 ARMC2Q8NEN0 867 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 DCAF4Q8WV16 495 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 MAML1Q92585 1016 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 USP6NLQ92738 828 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 SMC6Q96SB8 1091 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 PIH1D1Q9NWS0 290 aaKnown RBP13.73□□□□□ -0.21
SNX1-201ENST00000261889 PCSK1NQ9UHG2 260 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 FSCN2O14926 492 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 KRT1P04264 644 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 FOXR2Q6PJQ5 311 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 ALYREFQ86V81 257 aaKnown RBP13.73□□□□□ -0.21
SNX1-201ENST00000261889 TTLL6Q8N841 843 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 DDX1Q92499 740 aaKnown RBP13.73□□□□□ -0.21
SNX1-201ENST00000261889 ACCSQ96QU6 501 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 RNPEPL1Q9HAU8 725 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 HEY2Q9UBP5 337 aa13.73□□□□□ -0.21
SNX1-201ENST00000261889 MEI4A8MW99 385 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 ITIH2P19823 946 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 OSTNP61366 133 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 ACAD10Q6JQN1 1059 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 BTNL9Q6UXG8 535 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 CRELD2Q6UXH1 353 aaPredicted RBP13.72□□□□□ -0.21
SNX1-201ENST00000261889 STXBP4Q6ZWJ1 553 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 RHPN2Q8IUC4 686 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 MCOLN2Q8IZK6 566 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 MAGEC3Q8TD91 643 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 NRG4Q8WWG1 115 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 SHC3Q92529 594 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 MCEEQ96PE7 176 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 DIS3Q9Y2L1 958 aaKnown RBP13.72□□□□□ -0.21
SNX1-201ENST00000261889 BAG2O95816 211 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 CYP1A2P05177 515 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 NEK3P51956 506 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 INHBEP58166 350 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 KDSRQ06136 332 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 KRT39Q6A163 491 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 SLC39A4Q6P5W5 647 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 TRABD2AQ86V40 505 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 EMC1Q8N766 993 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 NLGN2Q8NFZ4 835 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 ATL2Q8NHH9 583 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 TCP10LQ8TDR4 215 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 ZNF516Q92618 1163 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 TMEM39BQ9GZU3 492 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 ACSS2Q9NR19 701 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 NMRK1Q9NWW6 199 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 CCPG1Q9ULG6 757 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 CHMP2BQ9UQN3 213 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 PCDHB4Q9Y5E5 795 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 SMAPO00193 183 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 STK10O94804 968 aaKnown RBP13.72□□□□□ -0.21
SNX1-201ENST00000261889 ASMTLO95671 621 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 FOSP01100 380 aaPredicted RBP13.72□□□□□ -0.21
SNX1-201ENST00000261889 NPTX2P47972 431 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 SARNPP82979 210 aaKnown RBP13.72□□□□□ -0.21
SNX1-201ENST00000261889 TAF5Q15542 800 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 TMEM179Q6ZVK1 233 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 MAB21L3Q8N8X9 362 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 FBXL13Q8NEE6 735 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms