RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 UPF3AQ9H1J1 476 aaKnown RBP14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 ATXN3LQ9H3M9 355 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 MRPL17Q9NRX2 175 aaKnown RBP14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 TRIM33Q9UPN9 1127 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 GPS1Q13098 491 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 PCSK7Q16549 785 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 MTHFD1LQ6UB35 978 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 WHAMMQ8TF30 809 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 CAPS2Q9BXY5 557 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 ASPSCR1Q9BZE9 553 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 ARHGEF38Q9NXL2 777 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 SLC39A10Q9ULF5 831 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 MAPK13O15264 365 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 ALDH5A1P51649 535 aaPredicted RBP14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 ZRANB3Q5FWF4 1079 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 C6orf118Q5T5N4 469 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 SPATS2Q86XZ4 545 aaKnown RBP14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 CCNYL1Q8N7R7 359 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 MAML1Q92585 1016 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 RPRD1AQ96P16 312 aaPredicted RBP14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 CNOT10Q9H9A5 744 aaKnown RBP14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 MEGF6O75095 1541 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 RHOBTB3O94955 611 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 PKP1Q13835 747 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 RRM2BQ7LG56 351 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 ZC3H18Q86VM9 953 aaKnown RBP14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 CNPY4Q8N129 248 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 HASPINQ8TF76 798 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 CIPCQ9C0C6 399 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 WDCPQ9H6R7 721 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 EFCAB14O75071 495 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 FBXO21O94952 628 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 PCDH8O95206 1070 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 NFE2Q16621 373 aaPredicted RBP14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 LY6KQ17RY6 165 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 DDIASQ8IXT1 998 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 SLC25A41Q8N5S1 370 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 CALML6Q8TD86 181 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 ZNF558Q96NG5 402 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 C7orf25Q9BPX7 421 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 LATS2Q9NRM7 1088 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 VWA5AO00534 786 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 CTIFO43310 598 aaKnown RBP14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 NFIAQ12857 509 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 ZNF284Q2VY69 593 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 CEP68Q76N32 757 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 DSG4Q86SJ6 1040 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 TRIM59Q8IWR1 403 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 NSMCE4AQ9NXX6 385 aa14.24□□□□□ -0.13
PDGFRB-201ENST00000261799 WDR91A4D1P6 747 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 CASTOR2A6NHX0 329 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 OGTO15294 1046 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 GHRP10912 638 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 PTPN21Q16825 1174 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 MCEEQ96PE7 176 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 OSMRQ99650 979 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 KIF2CQ99661 725 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 CCSER1Q9C0I3 900 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 FGFR1OP2Q9NVK5 253 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 COL5A2P05997 1499 aaPredicted RBP14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 SALL1Q9NSC2 1324 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 C5orf58C9J3I9 102 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 MTSS1O43312 755 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 RPA1P27694 616 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 UNC45BQ8IWX7 931 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 CPA5Q8WXQ8 436 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 ECT2Q9H8V3 914 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 DBR1Q9UK59 544 aaKnown RBP14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 SPATA31D1Q6ZQQ2 1576 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 CFLARO15519 480 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 CYP11B2P19099 503 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 SLCO1A2P46721 670 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 NDUFV1P49821 464 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 TMPRSS15P98073 1019 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 PDCLQ13371 301 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 PLCL1Q15111 1095 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 UGT3A1Q6NUS8 523 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 WDR48Q8TAF3 677 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 ELMO2Q96JJ3 720 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 TARS2Q9BW92 718 aaKnown RBP14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 EPB41L4AQ9HCS5 686 aaPredicted RBP14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 MSH4O15457 936 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 CASP1P29466 404 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 GUCY1A2P33402 732 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 AMHR2Q16671 573 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 ERAP2Q6P179 960 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 ZNF677Q86XU0 584 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 SNF8Q96H20 258 aa14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 AHCYL2Q96HN2 611 aaKnown RBP14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 AGO4Q9HCK5 861 aaKnown RBP14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 PACSIN2Q9UNF0 486 aaPredicted RBP14.23□□□□□ -0.13
PDGFRB-201ENST00000261799 A0A087WUV0 522 aaPredicted RBP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 HEATR9A2RTY3 570 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 FMO5P49326 533 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 GEMIN4P57678 1058 aaKnown RBP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 ZNF410Q86VK4 478 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 ZNF513Q8N8E2 541 aaPredicted RBP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 IGDCC4Q8TDY8 1250 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms