RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 SSC5DA1L4H1 1573 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 H0Y3Z8 333 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 GOLGA8RI6L899 631 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 DSG3P32926 999 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 MSH2P43246 934 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 STRN3Q13033 797 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 SEPT7Q16181 437 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 SYCP2LQ5T4T6 812 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 LIN9Q5TKA1 542 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 TRIM68Q6AZZ1 485 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 SLC39A4Q6P5W5 647 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 ANKS1BQ7Z6G8 1248 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 DDX27Q96GQ7 796 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 ZBTB45Q96K62 511 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 KLF6Q99612 283 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 SBF1O95248 1867 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 WDR64B1ANS9 1081 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 HLA-DRAP01903 254 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 NEFHP12036 1026 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 RPL7AP62424 266 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 ATP11AP98196 1134 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 SETDB1Q15047 1291 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 RHBDF2Q6PJF5 856 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 ZBED8Q8IZ13 594 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 ANKRD35Q8N283 1001 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 GPD1LQ8N335 351 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 MAIP1Q8WWC4 291 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 SPIRE2Q8WWL2 714 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 SAE1Q9UBE0 346 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 HAO1Q9UJM8 370 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 DNPEPQ9ULA0 475 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 NEU2Q9Y3R4 380 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 PCDHB2Q9Y5E7 798 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 ZNF646O15015 1829 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 NEBLO76041 1014 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 ICAM1P05362 532 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 PAX7P23759 505 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 CETN2P41208 172 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 ARSEP51690 589 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 PTK6Q13882 451 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 PKN2Q16513 984 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 ECHDC2Q86YB7 292 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 RHOT1Q8IXI2 618 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 MICAL1Q8TDZ2 1067 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 FBF1Q8TES7 1133 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 ZNF516Q92618 1163 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 CCDC134Q9H6E4 229 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 TBC1D22BQ9NU19 505 aa15.32■□□□□ 0.04
SFSWAP-201ENST00000261674 ADGRA3Q8IWK6 1321 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 GNA15P30679 374 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 MGAT5Q09328 741 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 DCUN1D2Q6PH85 259 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 C12orf50Q8NA57 414 aaPredicted RBP15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 TMEM143Q96AN5 459 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 C12orf65Q9H3J6 166 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 SLC24A3Q9HC58 644 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 NOP53Q9NZM5 478 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 LRRIQ4A6NIV6 560 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 UPP2O95045 317 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 WNT7BP56706 349 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 WDR4P57081 412 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 BNIP1Q12981 228 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 HHATQ5VTY9 493 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 PCNX4Q63HM2 1172 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 C12orf56Q8IXR9 622 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 TCHPQ9BT92 498 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 KIAA1683Q9H0B3 1180 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 TRABDQ9H4I3 376 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 ATP6V0A4Q9HBG4 840 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 AS3MTQ9HBK9 375 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 RXFP1Q9HBX9 757 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 DCTN4Q9UJW0 460 aa15.31■□□□□ 0.04
SFSWAP-201ENST00000261674 FAM47DPA6NHR8 397 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 SGK1O00141 431 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 KRT1P04264 644 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 TAC1P20366 129 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 BAATQ14032 418 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 TNFAIP8L3Q5GJ75 292 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 MIS18BP1Q6P0N0 1132 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 NCAPG2Q86XI2 1143 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 MAP4K3Q8IVH8 894 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 AFG3L2Q9Y4W6 797 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 ZNF536O15090 1300 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 LRRD1A4D1F6 860 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 PROSCO94903 275 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 FDX1P10109 184 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 UNGP13051 313 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 NCKAP1LP55160 1127 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 NLRP11P59045 1033 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 MCF2L2Q86YR7 1114 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 C4orf19Q8IY42 314 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 GBP7Q8N8V2 638 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 CLEC4DQ8WXI8 215 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 MIEF2Q96C03 454 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 MYPNQ86TC9 1320 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 KAT6AQ92794 2004 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 PECAM1P16284 738 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 MAN1A1P33908 653 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 GJA5P36382 358 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms