RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TBXAS1P24557 533 aaPredicted RBP16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 RAPGEF1Q13905 1077 aa16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 FUT10Q6P4F1 479 aa16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 TOP6BLQ8N6T0 577 aa16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 C17orf80Q9BSJ5 609 aa16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 NUP58Q9BVL2 599 aa16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 VN1R3Q9BXE9 311 aa16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 SPG21Q9NZD8 308 aa16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 CEP72Q9P209 647 aa16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 PCDHB12Q9Y5F1 795 aa16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 TIMM13Q9Y5L4 95 aaPredicted RBP16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 HUS1O60921 280 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 RFX1P22670 979 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 FXR1P51114 621 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 MFAP3P55082 362 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 TBX2Q13207 712 aaPredicted RBP16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 ARHGAP44Q17R89 818 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 WSCD1Q658N2 575 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 PDCL2Q8N4E4 241 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 UBR7Q8N806 425 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 APPL2Q8NEU8 664 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 CPLX3Q8WVH0 158 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 KBTBD7Q8WVZ9 684 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 BAP1Q92560 729 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 MRPL45Q9BRJ2 306 aaKnown RBP16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 GPR88Q9GZN0 384 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 SF3B1O75533 1304 aaKnown RBP eCLIP16.92■□□□□ 0.38e-6■■■■■ 107
CCDC90B-201ENST00000260054 CHD9Q3L8U1 2897 aa16.92■□□□□ 0.3
CCDC90B-201ENST00000260054 CHD7Q9P2D1 2997 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 CARNS1A5YM72 827 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 TRAPPC3O43617 180 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 CD58P19256 250 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 ACO1P21399 889 aaKnown RBP16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 CASP14P31944 242 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 CTNNB1P35222 781 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 PPM1AP35813 382 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 BMPR1AP36894 532 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 TAP1Q03518 808 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 DRAP1Q14919 205 aaPredicted RBP16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 ENOSF1Q7L5Y1 443 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 DPH6Q7L8W6 267 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 TAS1R1Q7RTX1 841 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 DRC7Q8IY82 874 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 RNF168Q8IYW5 571 aaPredicted RBP16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 SPC24Q8NBT2 197 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 TMEM169Q96HH4 297 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 STK33Q9BYT3 514 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 CYP3A43Q9HB55 503 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 CISHQ9NSE2 258 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 PCDHB8Q9UN66 801 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 DAAM1Q9Y4D1 1078 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 A0A1W2PQJ5 194 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 TACC1O75410 805 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 FGF18O76093 207 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 CYP11A1P05108 521 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 PNMA6AP0CW24 399 aaPredicted RBP16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 ODC1P11926 461 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 TKTP29401 623 aaKnown RBP16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 JAM2P57087 298 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 TRIM14Q14142 442 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 RAB30Q15771 203 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 FAM171A1Q5VUB5 890 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 CACNA2D4Q7Z3S7 1137 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 ADGRF2Q8IZF7 708 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 KLHL23Q8NBE8 558 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 SHC3Q92529 594 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 B3GALT6Q96L58 329 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 FAM81BQ96LP2 452 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 NKX2-4Q9H2Z4 354 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 HMGXB4Q9UGU5 601 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 MSRAQ9UJ68 235 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 MTUS1Q9ULD2 1270 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 CAPN11Q9UMQ6 739 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 RWDD3Q9Y3V2 267 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 NME7Q9Y5B8 376 aa16.91■□□□□ 0.3
CCDC90B-201ENST00000260054 F8VZ95 297 aa16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 FOXN3O00409 490 aaPredicted RBP16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 GOLGA8FQ08AF8 430 aa16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 GOLGA8DPQ0D2H9 430 aa16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 INCA1Q0VD86 236 aa16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 ELAVL2Q12926 359 aaKnown RBP16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 PPFIBP1Q86W92 1011 aa16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 OSTM1Q86WC4 334 aa16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 ANP32BQ92688 251 aaKnown RBP16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 JAKMIP2Q96AA8 810 aa16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 IQCDQ96DY2 449 aa16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 SPAG5Q96R06 1193 aa16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 EDEM3Q9BZQ6 932 aa16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 COLQQ9Y215 455 aaPredicted RBP16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 TSC2P49815 1807 aa16.9■□□□□ 0.3
CCDC90B-201ENST00000260054 NLRC5Q86WI3 1866 aa16.89■□□□□ 0.3
CCDC90B-201ENST00000260054 LRRC53A6NM62 1247 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 C5orf67F2Z3F1 127 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 GABRDO14764 452 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 SYN3O14994 580 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 HCRTO43612 131 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 CILPO75339 1184 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 TYMPP19971 482 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms