RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 SPATA18Q8TC71 538 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 C18orf8Q96DM3 657 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ATXN7L3BQ96GX2 97 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 CNPY3Q9BT09 278 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 VPS33BQ9H267 617 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PCMTD2Q9NV79 361 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 DIP2BQ9P265 1576 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TK2O00142 265 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 MAP3K13O43283 966 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PKN3Q6P5Z2 889 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 IYDQ6PHW0 289 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 APOBEC3FQ8IUX4 373 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ANKMY2Q8IV38 441 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 NSUN6Q8TEA1 469 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 HOXC10Q9NYD6 342 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PRKAG2Q9UGJ0 569 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 KNDC1Q76NI1 1749 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TOMM70O94826 608 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 EYA4O95677 639 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 DLGAP3O95886 979 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PKN2Q16513 984 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 LONRF1Q17RB8 773 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SYTL3Q4VX76 610 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TUBGCP3Q96CW5 907 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TNIP3Q96KP6 325 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ZFRQ96KR1 1074 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 C20orf96Q9NUD7 363 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 DCDC2Q9UHG0 476 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ADGRB2O60241 1585 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ALBP02768 609 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 CYP2E1P05181 493 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 LCP1P13796 627 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SULT1E1P49888 294 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ST13P50502 369 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SHC4Q6S5L8 630 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PPIL6Q8IXY8 311 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 MMGT1Q8N4V1 131 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PLEKHA8Q96JA3 519 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TMEM47Q9BQJ4 181 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 RBM12Q9NTZ6 932 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TMEM161AQ9NX61 479 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PCSK1NQ9UHG2 260 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 CLRN2A0PK11 232 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PDZK1P1A8MUH7 402 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SNRPAP09012 282 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SPRP35270 261 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SERPINB8P50452 374 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ARPP19P56211 112 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PTK6Q13882 451 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PTGISQ16647 500 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 MDH1BQ5I0G3 518 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TNS3Q68CZ2 1445 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SNX31Q8N9S9 440 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 MRPL48Q96GC5 212 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 FAM192AQ9GZU8 254 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 RSAD1Q9HA92 442 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SYBUQ9NX95 663 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 FAM153AQ9UHL3 310 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ADAM30Q9UKF2 790 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SFI1A8K8P3 1242 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PHF20L1A8MW92 1017 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 RASSF9O75901 435 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 GH2P01242 217 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 NUP107P57740 925 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 CCNI2Q6ZMN8 369 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 LRRC8DQ7L1W4 858 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 OXER1Q8TDS5 423 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SH3KBP1Q96B97 665 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SEC31BQ9NQW1 1179 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 CTCFP49711 727 aaPredicted RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 HPCAP84074 193 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 GTF2H3Q13889 308 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 MAPRE1Q15691 268 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 NMRK1Q9NWW6 199 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 F5H423 210 aaPredicted RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 NEMP1O14524 444 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 TEX33O43247 280 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 CYTH3O43739 400 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 PSMC3P17980 439 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ACADSBP45954 432 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 FOXD4Q12950 439 aaPredicted RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 C3orf62Q6ZUJ4 267 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ASIC4Q96FT7 647 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 VPS50Q96JG6 964 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 FAM49AQ9H0Q0 323 aaPredicted RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 RIC8BQ9NVN3 520 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 USE1Q9NZ43 259 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 FBXO2Q9UK22 296 aaPredicted RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 SCTRP47872 440 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 UGT3A1Q6NUS8 523 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 TTC23LQ6PF05 361 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 DDHD1Q8NEL9 900 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 CCDC126Q96EE4 140 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 KIF12Q96FN5 646 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 SPATA33Q96N06 139 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 MMP19Q99542 508 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 MRPS26Q9BYN8 205 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM9Q9C026 710 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 NOD2Q9HC29 1040 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ASAP1Q9ULH1 1129 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms