RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CD99L2Q8TCZ2 262 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 GIPC2Q8TF65 315 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 DDI1Q8WTU0 396 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 NRG4Q8WWG1 115 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 CKAP2Q8WWK9 683 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 PPP1R10Q96QC0 940 aaKnown RBP12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ZKSCAN3Q9BRR0 538 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 STK33Q9BYT3 514 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ROPN1BQ9BZX4 212 aaPredicted RBP12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ROPN1Q9HAT0 212 aaPredicted RBP12.48□□□□□ -0.41
CCNA1-201ENST00000255465 GIN1Q9NXP7 522 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.48□□□□□ -0.41
CCNA1-201ENST00000255465 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.48□□□□□ -0.41
CCNA1-201ENST00000255465 PCDHA13Q9Y5I0 950 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 A0A0G2JMZ2 1700 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ESYT3A0FGR9 886 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 DCDC2CA8MYV0 355 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 KCNJ18B7U540 433 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 CAPN9O14815 690 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 VILLO15195 856 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 TEX28O15482 410 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 FBXO21O94952 628 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 FGFR1OPO95684 399 aaKnown RBP12.48□□□□□ -0.41
CCNA1-201ENST00000255465 NDUFB10O96000 172 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 PTPREP23469 700 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 HMOX2P30519 316 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 CAP1Q01518 475 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ASPHQ12797 758 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 KCNJ12Q14500 433 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 NR1D2Q14995 579 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 MTFR1Q15390 333 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ANKDD1AQ495B1 522 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 METTL21CQ5VZV1 264 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 NIPAL1Q6NVV3 410 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 RWDD4Q6NW29 188 aaKnown RBP12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ERI1Q8IV48 349 aaKnown RBP12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ANKRD13CQ8N6S4 541 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 GMCL1P1Q8NEA9 526 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 TTC8Q8TAM2 541 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 SCFD2Q8WU76 684 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 NMD3Q96D46 503 aaKnown RBP12.48□□□□□ -0.41
CCNA1-201ENST00000255465 HINFPQ9BQA5 517 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 HEPHQ9BQS7 1158 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 USP29Q9HBJ7 922 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 PALMDQ9NP74 551 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 VTA1Q9NP79 307 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 NLRC4Q9NPP4 1024 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 MKS1Q9NXB0 559 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 TRIM33Q9UPN9 1127 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 NOX1Q9Y5S8 564 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 FUOMA2VDF0 154 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 COL9A3Q14050 684 aaPredicted RBP12.47□□□□□ -0.41
CCNA1-201ENST00000255465 COG2Q14746 738 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 FAM83BQ5T0W9 1011 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 KLHDC7AQ5VTJ3 777 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 NXNQ6DKJ4 435 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 CYB5R4Q7L1T6 521 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 NET1Q7Z628 596 aaPredicted RBP12.47□□□□□ -0.41
CCNA1-201ENST00000255465 SH3RF1Q7Z6J0 888 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 ZNF507Q8TCN5 953 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 SLC7A6OSQ96CW6 309 aaPredicted RBP12.47□□□□□ -0.41
CCNA1-201ENST00000255465 TMEM47Q9BQJ4 181 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 PYM1Q9BRP8 204 aaKnown RBP12.47□□□□□ -0.41
CCNA1-201ENST00000255465 TTYH3Q9C0H2 523 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 SEPT10Q9P0V9 454 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 LRWD1Q9UFC0 647 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 COQ6Q9Y2Z9 468 aa12.47□□□□□ -0.41
CCNA1-201ENST00000255465 TRIM64CA6NLI5 447 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 SPDYE16A6NNV3 312 aaPredicted RBP12.46□□□□□ -0.41
CCNA1-201ENST00000255465 ESRRBO95718 433 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 ZCCHC18P0CG32 403 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 RXRAP19793 462 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 RPS3AP61247 264 aaKnown RBP12.46□□□□□ -0.41
CCNA1-201ENST00000255465 ARHGAP4P98171 946 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 HSPA14Q0VDF9 509 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 FAM110CQ1W6H9 321 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 CTC1Q2NKJ3 1217 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 SLFN13Q68D06 897 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 DENND2CQ68D51 928 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 LBX2Q6XYB7 198 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 RALYLQ86SE5 291 aaKnown RBP12.46□□□□□ -0.41
CCNA1-201ENST00000255465 DGKHQ86XP1 1220 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 ACTRT1Q8TDG2 376 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 ZSCAN10Q96SZ4 725 aaPredicted RBP12.46□□□□□ -0.41
CCNA1-201ENST00000255465 CTRCQ99895 268 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 C2orf49Q9BVC5 232 aaPredicted RBP12.46□□□□□ -0.41
CCNA1-201ENST00000255465 TRIM55Q9BYV6 548 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 RBM38Q9H0Z9 239 aaKnown RBP12.46□□□□□ -0.41
CCNA1-201ENST00000255465 PABPC3Q9H361 631 aaKnown RBP12.46□□□□□ -0.41
CCNA1-201ENST00000255465 TXNRD2Q9NNW7 524 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 KRT82Q9NSB4 513 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 TBC1D23Q9NUY8 699 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 FGFR1OP2Q9NVK5 253 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 MORF4L1Q9UBU8 362 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 SERTAD1Q9UHV2 236 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 PADI4Q9UM07 663 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 STARD13Q9Y3M8 1113 aa12.46□□□□□ -0.41
CCNA1-201ENST00000255465 WDR19Q8NEZ3 1342 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms