RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 H2AFVQ71UI9 128 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 RTN4RL1Q86UN2 441 aaPredicted RBP10.1□□□□□ -0.79
NIP7-202ENST00000254941 RNF10Q8N5U6 811 aaKnown RBP10.1□□□□□ -0.79
NIP7-202ENST00000254941 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 LPPQ93052 612 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 SECISBP2LQ93073 1101 aaKnown RBP10.1□□□□□ -0.79
NIP7-202ENST00000254941 PCDHB18PQ96TA0 734 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 FTHL17Q9BXU8 183 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 SDCBP2Q9H190 292 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 SMYD3Q9H7B4 428 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 UBN1Q9NPG3 1134 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 SEPT11Q9NVA2 429 aaKnown RBP10.1□□□□□ -0.79
NIP7-202ENST00000254941 TAS2R14Q9NYV8 317 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 SALL4Q9UJQ4 1053 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 MICAL3Q7RTP6 2002 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 DCDC2CA8MYV0 355 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 C9IYK1 514 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 PPEF2O14830 753 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 NBNO60934 754 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 RTN2O75298 545 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 EOMESO95936 686 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 CALCAP01258 141 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 THP07101 528 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 HSPA1AP0DMV8 641 aaKnown RBP10.1□□□□□ -0.79
NIP7-202ENST00000254941 HSPA1BP0DMV9 641 aaKnown RBP10.1□□□□□ -0.79
NIP7-202ENST00000254941 LRPAP1P30533 357 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 PNPLA4P41247 253 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 GALCP54803 685 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 TNNC1P63316 161 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 INCA1Q0VD86 236 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 FAAP100Q0VG06 881 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 PLEKHG4Q58EX7 1191 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 SLC24A5Q71RS6 500 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 ZNF598Q86UK7 904 aaKnown RBP10.1□□□□□ -0.79
NIP7-202ENST00000254941 ECHDC2Q86YB7 292 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 SLC35F6Q8N357 371 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 TTC39CQ8N584 583 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 ZNF606Q8WXB4 792 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 PGBD4Q96DM1 585 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 RPS6KC1Q96S38 1066 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 TSPYL2Q9H2G4 693 aaPredicted RBP10.1□□□□□ -0.79
NIP7-202ENST00000254941 RSAD1Q9HA92 442 aa10.1□□□□□ -0.79
NIP7-202ENST00000254941 A0A0A6YYK5 440 aaPredicted RBP10.09□□□□□ -0.79
NIP7-202ENST00000254941 ANKRD62A6NC57 917 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 TMCO5BA8MYB1 307 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 CILPO75339 1184 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 FTLP02792 175 aaPredicted RBP10.09□□□□□ -0.79
NIP7-202ENST00000254941 PAEPP09466 180 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 TMEM253P0C7T8 217 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 UNGP13051 313 aaPredicted RBP10.09□□□□□ -0.79
NIP7-202ENST00000254941 CASQ1P31415 396 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 RAP1GAPP47736 663 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 AFF1P51825 1210 aaKnown RBP10.09□□□□□ -0.79
NIP7-202ENST00000254941 FAM189BP81408 668 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 TLE2Q04725 743 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 ZNF394Q53GI3 561 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 TRIM72Q6ZMU5 477 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 DNAAF5Q86Y56 855 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 TRIM58Q8NG06 486 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 WHAMMQ8TF30 809 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 ZNF560Q96MR9 790 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 MMS19Q96T76 1030 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 GOLGA2P5Q9HBQ8 144 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 MIOSQ9NXC5 875 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 GDAP2Q9NXN4 497 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 BARX2Q9UMQ3 279 aaPredicted RBP10.09□□□□□ -0.79
NIP7-202ENST00000254941 SNX9Q9Y5X1 595 aa10.09□□□□□ -0.79
NIP7-202ENST00000254941 KPNA7A9QM74 516 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 INPPL1O15357 1258 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 THAP12O43422 761 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 PARNO95453 639 aaKnown RBP10.08□□□□□ -0.8
NIP7-202ENST00000254941 CYP1A1P04798 512 aaPredicted RBP10.08□□□□□ -0.8
NIP7-202ENST00000254941 TAF6P49848 677 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 RAD23BP54727 409 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 LILRA4P59901 499 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 CLEC16AQ2KHT3 1053 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 TRIM60Q495X7 471 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 DIS3LQ8TF46 1054 aaKnown RBP10.08□□□□□ -0.8
NIP7-202ENST00000254941 LINC01599Q8WXQ3 324 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 CTNNBL1Q8WYA6 563 aaPredicted RBP10.08□□□□□ -0.8
NIP7-202ENST00000254941 NOX5Q96PH1 765 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 HIPK3Q9H422 1215 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 CAPN6Q9Y6Q1 641 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 LAMA2P24043 3122 aaKnown RBP10.08□□□□□ -0.8
NIP7-202ENST00000254941 CTAGE9A4FU28 777 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 SPTLC1O15269 473 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 TACC1O75410 805 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 MOCS3O95396 460 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 CAPN2P17655 700 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 RPL9P32969 192 aaKnown RBP10.08□□□□□ -0.8
NIP7-202ENST00000254941 SCNN1GP51170 649 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 CENPCQ03188 943 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 SV2CQ496J9 727 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 ACAD10Q6JQN1 1059 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 LIMS2Q7Z4I7 341 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 SLC4A11Q8NBS3 891 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 RNF169Q8NCN4 708 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 DBF4BQ8NFT6 615 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 RFFLQ8WZ73 363 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 TFAP2BQ92481 460 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms