RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 FSCN2O14926 492 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 SORBS3O60504 671 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 GMPSP49915 693 aaPredicted RBP20.06■□□□□ 0.8
SNX4-201ENST00000251775 CDR2Q01850 454 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 TRIP13Q15645 432 aaPredicted RBP20.06■□□□□ 0.8
SNX4-201ENST00000251775 DDX1Q92499 740 aaKnown RBP20.06■□□□□ 0.8
SNX4-201ENST00000251775 EURLQ9NYK6 297 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 ZNF214Q9UL59 606 aaPredicted RBP20.06■□□□□ 0.8
SNX4-201ENST00000251775 STARD13Q9Y3M8 1113 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 MYH9P35579 1960 aaKnown RBP20.06■□□□□ 0.8
SNX4-201ENST00000251775 CDH16O75309 829 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 CALCAP01258 141 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 CYP1A2P05177 515 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 POTEJP0CG39 1038 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 ATP6V1C1P21283 382 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 SETDB1Q15047 1291 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 PRAMEF18Q5VWM3 479 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 AP1ARQ63HQ0 302 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 TAS1R3Q7RTX0 852 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 CCDC60Q8IWA6 550 aaPredicted RBP20.06■□□□□ 0.8
SNX4-201ENST00000251775 SCYL3Q8IZE3 742 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 ATP6V0A1Q93050 837 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 ZNF653Q96CK0 615 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 PI4K2AQ9BTU6 479 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 C17orf75Q9HAS0 396 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 ACTL7BQ9Y614 415 aa20.06■□□□□ 0.8
SNX4-201ENST00000251775 MAFGO15525 162 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 AHCYL1O43865 530 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 GRIN3BO60391 1043 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 TUBP50607 506 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 HMGCS2P54868 508 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 IL9RQ01113 521 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 PTK6Q13882 451 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 DALRD3Q5D0E6 543 aaKnown RBP20.05■□□□□ 0.8
SNX4-201ENST00000251775 CMPK2Q5EBM0 449 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 ENDOVQ8N8Q3 282 aaKnown RBP20.05■□□□□ 0.8
SNX4-201ENST00000251775 ZNF280CQ8ND82 737 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 ATG4AQ8WYN0 398 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 INPP5DQ92835 1189 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 SLC7A6OSQ96CW6 309 aaPredicted RBP20.05■□□□□ 0.8
SNX4-201ENST00000251775 T-ENOLP0DO92 83 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 PTPRAP18433 802 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 RPS12P25398 132 aaKnown RBP20.05■□□□□ 0.8
SNX4-201ENST00000251775 DSG3P32926 999 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 MOGSQ13724 837 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 POTEAQ6S8J7 498 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 EGFL6Q8IUX8 553 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 GPD1LQ8N335 351 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 ASAP3Q8TDY4 903 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 NSUN6Q8TEA1 469 aaKnown RBP20.05■□□□□ 0.8
SNX4-201ENST00000251775 LRRC37BQ96QE4 947 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 NUDCD1Q96RS6 583 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 RGS17Q9UGC6 210 aaPredicted RBP20.05■□□□□ 0.8
SNX4-201ENST00000251775 SEPT9Q9UHD8 586 aaPredicted RBP20.05■□□□□ 0.8
SNX4-201ENST00000251775 USH1CQ9Y6N9 552 aa20.05■□□□□ 0.8
SNX4-201ENST00000251775 HNRNPDLO14979 420 aaKnown RBP20.04■□□□□ 0.8
SNX4-201ENST00000251775 MAGEB2O15479 319 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 PSAPP07602 524 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 GTF2H1P32780 548 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 PCK1P35558 622 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 DNAJC3Q13217 504 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 TMEM132BQ14DG7 1078 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 SPOCK2Q92563 424 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 FAM213AQ9BRX8 229 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 TBC1D10AQ9BXI6 508 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 JPH1Q9HDC5 661 aaPredicted RBP20.04■□□□□ 0.8
SNX4-201ENST00000251775 GTF3C4Q9UKN8 822 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 ANKRD33BA6NCL7 494 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 FAM47DPA6NHR8 397 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 DGAT1O75907 488 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 ASMTLO95671 621 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 PRUNE1Q86TP1 453 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 ZNF516Q92618 1163 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 WRNIP1Q96S55 665 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 PAIP2Q9BPZ3 127 aaKnown RBP20.04■□□□□ 0.8
SNX4-201ENST00000251775 TRAIPQ9BWF2 469 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 ZNF112Q9UJU3 913 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 PHTF1Q9UMS5 762 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 ADAMTS5Q9UNA0 930 aa20.04■□□□□ 0.8
SNX4-201ENST00000251775 KLHL33A6NCF5 533 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 SPDYE5A6NIY4 337 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 RASA4BC9J798 803 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 ABLIM1O14639 778 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 RASA4O43374 803 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 PDHA1P08559 390 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 MRPS35P82673 323 aaKnown RBP20.03■□□□□ 0.8
SNX4-201ENST00000251775 PRKCEQ02156 737 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 LONP2Q86WA8 852 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 LMNTD2Q8IXW0 634 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.03■□□□□ 0.8
SNX4-201ENST00000251775 HERPUD2Q9BSE4 406 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 AS3MTQ9HBK9 375 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 CYP26B1Q9NR63 512 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 SLC9A2Q9UBY0 812 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 ANAPC5Q9UJX4 755 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 LCTP09848 1927 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 MAP3K13O43283 966 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 EPHB2P29323 1055 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 ACTR2P61160 394 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 TGFB2P61812 414 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms