RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SEC16BQ96JE7 1060 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 SOCS7O14512 581 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 PGK2P07205 417 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 AP3M2P53677 418 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 GRM1Q13255 1194 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 PRUNE1Q86TP1 453 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 CHMP6Q96FZ7 201 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 SCLT1Q96NL6 688 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 ZNF317Q96PQ6 595 aaPredicted RBP20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 GPR20Q99678 358 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 CPSF3Q9UKF6 684 aaKnown RBP20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 ANK1P16157 1881 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 TCRBV5S1A1TA0A578 114 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 TMEM191CA6NGB0 347 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 IRF6O14896 467 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 OGTO15294 1046 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 CNMDO75829 334 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 PRKCBP05771 671 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 TMEM191BP0C7N4 346 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 BBXQ8WY36 941 aaPredicted RBP20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 FGD4Q96M96 766 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 TRAIPQ9BWF2 469 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 ROPN1BQ9BZX4 212 aaPredicted RBP20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 ROPN1Q9HAT0 212 aaPredicted RBP20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 HOMER3Q9NSC5 361 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 CISHQ9NSE2 258 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 IP6K2Q9UHH9 426 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 ANAPC5Q9UJX4 755 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 MCM3APO60318 1980 aa20.72■□□□□ 0.91
CDC42EP1-201ENST00000249014 PI4K2BG5E9Z4 385 aa20.71■□□□□ 0.91
CDC42EP1-201ENST00000249014 MCL1Q07820 350 aa20.71■□□□□ 0.91
CDC42EP1-201ENST00000249014 RNF187Q5TA31 235 aaPredicted RBP20.71■□□□□ 0.91
CDC42EP1-201ENST00000249014 EXOC3L1Q86VI1 746 aa20.71■□□□□ 0.91
CDC42EP1-201ENST00000249014 ZNF668Q96K58 619 aaPredicted RBP20.71■□□□□ 0.91
CDC42EP1-201ENST00000249014 FAM167AQ96KS9 214 aa20.71■□□□□ 0.91
CDC42EP1-201ENST00000249014 DICER1Q9UPY3 1922 aaKnown RBP20.71■□□□□ 0.91
CDC42EP1-201ENST00000249014 TTC4O95801 387 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 GJB1P08034 283 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 WEE2P0C1S8 567 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 KRT10P13645 584 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 OGDHQ02218 1023 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 NFX1Q12986 1120 aaKnown RBP20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 MAPK6Q16659 721 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 KYNUQ16719 465 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 PPP1R2P3Q6NXS1 205 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 CPLX4Q7Z7G2 160 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 WDTC1Q8N5D0 677 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 MCEEQ96PE7 176 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 JPH2Q9BR39 696 aaPredicted RBP20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 NIF3L1Q9GZT8 377 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 CSADQ9Y600 493 aa20.7■□□□□ 0.91
CDC42EP1-201ENST00000249014 IGKV6-21A0A0C4DH24 114 aa20.7■□□□□ 0.9
CDC42EP1-201ENST00000249014 ADM5C9JUS6 153 aa20.7■□□□□ 0.9
CDC42EP1-201ENST00000249014 HOXC6P09630 235 aa20.7■□□□□ 0.9
CDC42EP1-201ENST00000249014 IRX3P78415 501 aaPredicted RBP20.7■□□□□ 0.9
CDC42EP1-201ENST00000249014 DUOXA2Q1HG44 320 aa20.7■□□□□ 0.9
CDC42EP1-201ENST00000249014 TRAPPC12Q8WVT3 735 aa20.7■□□□□ 0.9
CDC42EP1-201ENST00000249014 TFAP2BQ92481 460 aa20.7■□□□□ 0.9
CDC42EP1-201ENST00000249014 F8VP50 259 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 LGR5O75473 907 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 KLRC2P26717 231 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 TFAMQ00059 246 aaKnown RBP20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 CAV1Q03135 178 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 MXD4Q14582 209 aaPredicted RBP20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 SGSM1Q2NKQ1 1148 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 KAZNQ674X7 775 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 GPAT2Q6NUI2 795 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 SCARA5Q6ZMJ2 495 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 ZNF365Q70YC5 407 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 ARMC9Q7Z3E5 817 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 CDR2LQ86X02 465 aaPredicted RBP20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 RHPN2Q8IUC4 686 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 ZBTB8OSQ8IWT0 167 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 TCP11Q8WWU5 503 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 ZBTB10Q96DT7 871 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 OTUD5Q96G74 571 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 SLITRK1Q96PX8 696 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 PRMT1Q99873 361 aaKnown RBP20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 STMN4Q9H169 189 aaPredicted RBP20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 ASCC2Q9H1I8 757 aaPredicted RBP20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 ELP3Q9H9T3 547 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 TXNRD2Q9NNW7 524 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 INTS9Q9NV88 658 aaKnown RBP20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 CTNNAL1Q9UBT7 734 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 CAPN7Q9Y6W3 813 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 IVNS1ABPQ9Y6Y0 642 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 FSBPO95073 299 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 CALB1P05937 261 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 OSTNP61366 133 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 PLCB4Q15147 1175 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 CELF3Q5SZQ8 465 aaKnown RBP20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 TMEM63BQ5T3F8 832 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 GKAP1Q5VSY0 366 aaPredicted RBP20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 TXNRD3NBQ6F5E7 133 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 MFSD7Q6UXD7 560 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 CACNA2D3Q8IZS8 1091 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 CEP120Q8N960 986 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 IPO4Q8TEX9 1081 aaKnown RBP20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 CABS1Q96KC9 395 aa20.69■□□□□ 0.9
CDC42EP1-201ENST00000249014 XYLT2Q9H1B5 865 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms