RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TIMM13Q9Y5L4 95 aaPredicted RBP26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 TSC2P49815 1807 aa26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 WDR27A2RRH5 827 aa26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 CYB561D2O14569 222 aa26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 KRT19P08727 400 aa26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 POU2F2P09086 479 aa26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 WEE2P0C1S8 567 aa26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 DLATP10515 647 aaKnown RBP26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 ATF2P15336 505 aa26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 COBLL1Q53SF7 1204 aa26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 ZNF658Q5TYW1 1059 aaPredicted RBP26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 BORCS6Q96GS4 357 aa26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 RPGRIP1Q96KN7 1286 aa26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 USTQ9Y2C2 406 aa26.24■■□□□ 1.79
SDF2L1-201ENST00000248958 RPL13P26373 211 aaKnown RBP26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 AP3M2P53677 418 aa26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 ARPP19P56211 112 aa26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 MYO1EQ12965 1108 aa26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 THEM5Q8N1Q8 247 aa26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 OR5B17Q8NGF7 314 aa26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 CXorf38Q8TB03 319 aa26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 CCDC127Q96BQ5 260 aa26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 ZNF707Q96C28 371 aaPredicted RBP26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 WDR6Q9NNW5 1121 aaKnown RBP26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 AFF4Q9UHB7 1163 aaKnown RBP26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 CDH22Q9UJ99 828 aa26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 FRMD4BQ9Y2L6 1034 aa26.23■■□□□ 1.79
SDF2L1-201ENST00000248958 MAPK13O15264 365 aa26.22■■□□□ 1.79
SDF2L1-201ENST00000248958 XYLBO75191 536 aa26.22■■□□□ 1.79
SDF2L1-201ENST00000248958 CPB1P15086 417 aa26.22■■□□□ 1.79
SDF2L1-201ENST00000248958 LMBRD2Q68DH5 695 aaPredicted RBP26.22■■□□□ 1.79
SDF2L1-201ENST00000248958 TCEAL8Q8IYN2 117 aa26.22■■□□□ 1.79
SDF2L1-201ENST00000248958 SLC7A14Q8TBB6 771 aa26.22■■□□□ 1.79
SDF2L1-201ENST00000248958 SPATA18Q8TC71 538 aa26.22■■□□□ 1.79
SDF2L1-201ENST00000248958 GDAP2Q9NXN4 497 aa26.22■■□□□ 1.79
SDF2L1-201ENST00000248958 SIX4Q9UIU6 781 aa26.22■■□□□ 1.79
SDF2L1-201ENST00000248958 MAPK8IP1Q9UQF2 711 aa26.22■■□□□ 1.79
SDF2L1-201ENST00000248958 PTPRJQ12913 1337 aa26.21■■□□□ 1.79
SDF2L1-201ENST00000248958 BFSP1Q12934 665 aa26.21■■□□□ 1.79
SDF2L1-201ENST00000248958 TRAPPC11Q7Z392 1133 aa26.21■■□□□ 1.79
SDF2L1-201ENST00000248958 PLCD3Q8N3E9 789 aa26.21■■□□□ 1.79
SDF2L1-201ENST00000248958 NCOR1O75376 2440 aa26.21■■□□□ 1.79
SDF2L1-201ENST00000248958 PRRG1O14668 218 aa26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 HUS1O60921 280 aa26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 PPP1R2P41236 205 aa26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 GPR17Q13304 367 aa26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 EDRF1Q3B7T1 1238 aa26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 CEP135Q66GS9 1140 aa26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 DPH6Q7L8W6 267 aa26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 OTOP3Q7RTS5 596 aa26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 TMEM86AQ8N2M4 240 aa26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 PARD3BQ8TEW8 1205 aa26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 ACSF2Q96CM8 615 aaPredicted RBP26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 CYP4F11Q9HBI6 524 aa26.2■■□□□ 1.78
SDF2L1-201ENST00000248958 CLUHO75153 1309 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 LRG1P02750 347 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 ALADP13716 330 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 NR2F2P24468 414 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 CLDN10P78369 228 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 CLEC17AQ6ZS10 378 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 RNF135Q8IUD6 432 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 ZDHHC14Q8IZN3 488 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 TOP6BLQ8N6T0 577 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 TDRD5Q8NAT2 981 aaKnown RBP26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 TMC2Q8TDI7 906 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 HPDLQ96IR7 371 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 IPO9Q96P70 1041 aaKnown RBP26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 TSHZ2Q9NRE2 1034 aa26.19■■□□□ 1.78
SDF2L1-201ENST00000248958 PRCPP42785 496 aa26.18■■□□□ 1.78
SDF2L1-201ENST00000248958 ENPEPQ07075 957 aa26.18■■□□□ 1.78
SDF2L1-201ENST00000248958 ADCY1Q08828 1119 aa26.18■■□□□ 1.78
SDF2L1-201ENST00000248958 SMARCB1Q12824 385 aa26.18■■□□□ 1.78
SDF2L1-201ENST00000248958 ADAM9Q13443 819 aa26.18■■□□□ 1.78
SDF2L1-201ENST00000248958 STIM1Q13586 685 aa26.18■■□□□ 1.78
SDF2L1-201ENST00000248958 ZCWPW2Q504Y3 356 aa26.18■■□□□ 1.78
SDF2L1-201ENST00000248958 WSCD1Q658N2 575 aa26.18■■□□□ 1.78
SDF2L1-201ENST00000248958 HSFX1Q9UBD0 423 aa26.18■■□□□ 1.78
SDF2L1-201ENST00000248958 SNX9Q9Y5X1 595 aa26.18■■□□□ 1.78
SDF2L1-201ENST00000248958 PI4K2BG5E9Z4 385 aa26.17■■□□□ 1.78
SDF2L1-201ENST00000248958 CCL16O15467 120 aa26.17■■□□□ 1.78
SDF2L1-201ENST00000248958 CASP4P49662 377 aa26.17■■□□□ 1.78
SDF2L1-201ENST00000248958 TRPC3Q13507 836 aa26.17■■□□□ 1.78
SDF2L1-201ENST00000248958 CENPPQ6IPU0 288 aa26.17■■□□□ 1.78
SDF2L1-201ENST00000248958 RNF19BQ6ZMZ0 732 aa26.17■■□□□ 1.78
SDF2L1-201ENST00000248958 SMYD4Q8IYR2 804 aaPredicted RBP26.17■■□□□ 1.78
SDF2L1-201ENST00000248958 FEZF2Q8TBJ5 459 aa26.17■■□□□ 1.78
SDF2L1-201ENST00000248958 TSG101Q99816 390 aa26.17■■□□□ 1.78
SDF2L1-201ENST00000248958 GZF1Q9H116 711 aaPredicted RBP26.17■■□□□ 1.78
SDF2L1-201ENST00000248958 C2CD4DB7Z1M9 353 aa26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 IKBKBO14920 756 aa26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 PHACTR2O75167 634 aa26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 STAU1O95793 577 aaKnown RBP26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 ATICP31939 592 aa26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 PSMC2P35998 433 aaKnown RBP26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 INTS8Q75QN2 995 aaKnown RBP26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 PDCL2Q8N4E4 241 aa26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 C2orf15Q8WU43 125 aaKnown RBP26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 ZNF516Q92618 1163 aa26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 ERCC4Q92889 916 aaPredicted RBP26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 FAM84AQ96KN4 292 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms