RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 GTPBP4Q9BZE4 634 aaKnown RBP13.78□□□□□ -0.2
VPREB3-201ENST00000248948 PIDD1Q9HB75 910 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 AFF4Q9UHB7 1163 aaKnown RBP13.78□□□□□ -0.2
VPREB3-201ENST00000248948 PTPRJQ12913 1337 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 OBSL1O75147 1896 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 KPNA7A9QM74 516 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 C2CD4DB7Z1M9 353 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 CLIC2O15247 247 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 CALUO43852 315 aaPredicted RBP13.77□□□□□ -0.21
VPREB3-201ENST00000248948 EXOC3O60645 756 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 NFIL3Q16649 462 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 DUOXA2Q1HG44 320 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 TCEAL8Q8IYN2 117 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 NUP210Q8TEM1 1887 aaPredicted RBP13.77□□□□□ -0.21
VPREB3-201ENST00000248948 KHSRPQ92945 711 aaKnown RBP eCLIP13.77□□□□□ -0.21
VPREB3-201ENST00000248948 ACSF2Q96CM8 615 aaPredicted RBP13.77□□□□□ -0.21
VPREB3-201ENST00000248948 GSDMAQ96QA5 445 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 FNBP1Q96RU3 617 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 TSHZ2Q9NRE2 1034 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 TRAF3IP3Q9Y228 551 aa13.77□□□□□ -0.21
VPREB3-201ENST00000248948 CYB561D2O14569 222 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 KINO60870 393 aaKnown RBP13.76□□□□□ -0.21
VPREB3-201ENST00000248948 SMC2O95347 1197 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 NR3C1P04150 777 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 ELF1P32519 619 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 RBP5P82980 135 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 MYO1EQ12965 1108 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 PNOCQ13519 176 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 PTPN21Q16825 1174 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 COBLL1Q53SF7 1204 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 METTL23Q86XA0 190 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 OR5B17Q8NGF7 314 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 SPATA20Q8TB22 786 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 FEZF2Q8TBJ5 459 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 BORCS6Q96GS4 357 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 MFSD14AQ96MC6 490 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 DMAC2Q9NW81 257 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 GDAP2Q9NXN4 497 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 HSFX1Q9UBD0 423 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 MUTYHQ9UIF7 546 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 SIX4Q9UIU6 781 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 AGAP1Q9UPQ3 857 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 R3HCC1Q9Y3T6 440 aaKnown RBP13.76□□□□□ -0.21
VPREB3-201ENST00000248948 TIMM13Q9Y5L4 95 aaPredicted RBP13.76□□□□□ -0.21
VPREB3-201ENST00000248948 INSL5Q9Y5Q6 135 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 DENND4CQ5VZ89 1909 aa13.76□□□□□ -0.21
VPREB3-201ENST00000248948 PRRG1O14668 218 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 MAPK13O15264 365 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 LRG1P02750 347 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 KRT19P08727 400 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 DLATP10515 647 aaKnown RBP13.75□□□□□ -0.21
VPREB3-201ENST00000248948 SP100P23497 879 aaPredicted RBP13.75□□□□□ -0.21
VPREB3-201ENST00000248948 AP3M2P53677 418 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 ARPP19P56211 112 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 CLDN10P78369 228 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 ENPEPQ07075 957 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 SMARCB1Q12824 385 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 BFSP1Q12934 665 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 GPR17Q13304 367 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 PLD1Q13393 1074 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 ZCWPW2Q504Y3 356 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 TMEM86AQ8N2M4 240 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 CSGALNACT2Q8N6G5 542 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 TOP6BLQ8N6T0 577 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 OR10T2Q8NGX3 314 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 CYP4F11Q9HBI6 524 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 EPS15L1Q9UBC2 864 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 ZFP37Q9Y6Q3 630 aaPredicted RBP13.75□□□□□ -0.21
VPREB3-201ENST00000248948 TRIOO75962 3097 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 MYO10Q9HD67 2058 aa13.75□□□□□ -0.21
VPREB3-201ENST00000248948 KMT2EQ8IZD2 1858 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 TECTAO75443 2155 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 STAU1O95793 577 aaKnown RBP13.74□□□□□ -0.21
VPREB3-201ENST00000248948 TNNI1P19237 187 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 ADCY1Q08828 1119 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 MTMR3Q13615 1198 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 EDRF1Q3B7T1 1238 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 ZNF658Q5TYW1 1059 aaPredicted RBP13.74□□□□□ -0.21
VPREB3-201ENST00000248948 LMBRD2Q68DH5 695 aaPredicted RBP13.74□□□□□ -0.21
VPREB3-201ENST00000248948 RNF19BQ6ZMZ0 732 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 TRAPPC11Q7Z392 1133 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 THEM5Q8N1Q8 247 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 RDH13Q8NBN7 331 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 C2orf15Q8WU43 125 aaKnown RBP13.74□□□□□ -0.21
VPREB3-201ENST00000248948 SMARCE1Q969G3 411 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 CCDC127Q96BQ5 260 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 ZCWPW1Q9H0M4 648 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 GZF1Q9H116 711 aaPredicted RBP13.74□□□□□ -0.21
VPREB3-201ENST00000248948 AVENQ9NQS1 362 aaPredicted RBP13.74□□□□□ -0.21
VPREB3-201ENST00000248948 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.74□□□□□ -0.21
VPREB3-201ENST00000248948 SORCS3Q9UPU3 1222 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 FRMD4BQ9Y2L6 1034 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 YIPF1Q9Y548 306 aa13.74□□□□□ -0.21
VPREB3-201ENST00000248948 GREB1Q4ZG55 1949 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 MTMR11A4FU01 709 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 CCL16O15467 120 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 HUS1O60921 280 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 SEC24AO95486 1093 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 FSHRP23945 695 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms