RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PLVAPQ9BX97 442 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 TXLNGYQ9BZA5 131 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 PABPC3Q9H361 631 aaKnown RBP16.74■□□□□ 0.27
LRFN1-201ENST00000248668 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.74■□□□□ 0.27
LRFN1-201ENST00000248668 TJP2Q9UDY2 1190 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.74■□□□□ 0.27
LRFN1-201ENST00000248668 SPDYE5A6NIY4 337 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 GOLGA8SH3BPF8 625 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 CCDC38Q502W7 563 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 ZPBP2Q6X784 338 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 CCDC125Q86Z20 511 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 PAPPA2Q9BXP8 1791 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 EBAG9O00559 213 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 FSCN2O14926 492 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 ZNF286BP0CG31 522 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 CPB2Q96IY4 423 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 FAM81BQ96LP2 452 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 SELENOSQ9BQE4 189 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 GINS2Q9Y248 185 aa16.73■□□□□ 0.27
LRFN1-201ENST00000248668 F8VP50 259 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 CHKAP35790 457 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 TXNRD3NBQ6F5E7 133 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 DCUN1D2Q6PH85 259 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 WDR49Q8IV35 697 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 TRIM11Q96F44 468 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 CEP350Q5VT06 3117 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 VTNP04004 478 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 MYBL1P10243 752 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 GJA5P36382 358 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 IFI35P80217 286 aaPredicted RBP16.72■□□□□ 0.27
LRFN1-201ENST00000248668 MXD4Q14582 209 aaPredicted RBP16.72■□□□□ 0.27
LRFN1-201ENST00000248668 PTGISQ16647 500 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 CYP1B1Q16678 543 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.72■□□□□ 0.27
LRFN1-201ENST00000248668 NIF3L1Q9GZT8 377 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 FOXO6A8MYZ6 492 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 SLC25A27O95847 323 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 HOXC6P09630 235 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 PTP4A2Q12974 167 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 TCP11Q8WWU5 503 aa16.72■□□□□ 0.27
LRFN1-201ENST00000248668 CPSF3Q9UKF6 684 aaKnown RBP16.72■□□□□ 0.27
LRFN1-201ENST00000248668 CXCL11O14625 94 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 ADCY8P40145 1251 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 WDR72Q3MJ13 1102 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 FEZF2Q8TBJ5 459 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 LRRC19Q9H756 370 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 AKT3Q9Y243 479 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 ABLIM1O14639 778 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 NFICP08651 508 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 YBX3P16989 372 aaKnown RBP eCLIP16.71■□□□□ 0.27
LRFN1-201ENST00000248668 FNTAP49354 379 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 PPP2R2AP63151 447 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 FAM182AQ5T1J6 154 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 MPZL3Q6UWV2 235 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 SUGP1Q8IWZ8 645 aaKnown RBP16.71■□□□□ 0.27
LRFN1-201ENST00000248668 RHOT1Q8IXI2 618 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 SCLT1Q96NL6 688 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 MPHOSPH6Q99547 160 aaKnown RBP16.71■□□□□ 0.27
LRFN1-201ENST00000248668 OSBPL8Q9BZF1 889 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 DCLK3Q9C098 648 aa16.71■□□□□ 0.27
LRFN1-201ENST00000248668 MRPL47Q9HD33 250 aaKnown RBP16.71■□□□□ 0.27
LRFN1-201ENST00000248668 A0A087WZ62 844 aa16.71■□□□□ 0.26
LRFN1-201ENST00000248668 PIK3R2O00459 728 aa16.71■□□□□ 0.26
LRFN1-201ENST00000248668 INSRRP14616 1297 aa16.71■□□□□ 0.26
LRFN1-201ENST00000248668 OGDHQ02218 1023 aa16.71■□□□□ 0.26
LRFN1-201ENST00000248668 MOGSQ13724 837 aa16.71■□□□□ 0.26
LRFN1-201ENST00000248668 DNAJC24Q6P3W2 148 aa16.71■□□□□ 0.26
LRFN1-201ENST00000248668 CCDC62Q6P9F0 684 aa16.71■□□□□ 0.26
LRFN1-201ENST00000248668 GSTA5Q7RTV2 222 aa16.71■□□□□ 0.26
LRFN1-201ENST00000248668 FDXACB1Q9BRP7 624 aaPredicted RBP16.71■□□□□ 0.26
LRFN1-201ENST00000248668 RNF19AQ9NV58 838 aa16.71■□□□□ 0.26
LRFN1-201ENST00000248668 IVNS1ABPQ9Y6Y0 642 aa16.71■□□□□ 0.26
LRFN1-201ENST00000248668 GPR25O00155 361 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 OSBPP22059 807 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 SLC1A1P43005 524 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 ITGA8P53708 1063 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 DRG2P55039 364 aaKnown RBP16.7■□□□□ 0.26
LRFN1-201ENST00000248668 MCL1Q07820 350 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 CDCA2Q69YH5 1023 aaPredicted RBP16.7■□□□□ 0.26
LRFN1-201ENST00000248668 PLEKHA7Q6IQ23 1121 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 ARMCX2Q7L311 632 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 EPN3Q9H201 632 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 CDT1Q9H211 546 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 SLC24A3Q9HC58 644 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 PARVAQ9NVD7 372 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 HNRNPH1P31943 449 aaKnown RBP16.7■□□□□ 0.26
LRFN1-201ENST00000248668 LACTBP83111 547 aaPredicted RBP16.7■□□□□ 0.26
LRFN1-201ENST00000248668 TTLL4Q14679 1199 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 LONRF1Q17RB8 773 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 SMTNL2Q2TAL5 461 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 TRIM72Q6ZMU5 477 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 PHF13Q86YI8 300 aaPredicted RBP16.7■□□□□ 0.26
LRFN1-201ENST00000248668 TAB3Q8N5C8 712 aaPredicted RBP16.7■□□□□ 0.26
LRFN1-201ENST00000248668 ART4Q93070 314 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 CCT8L2Q96SF2 557 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 SMARCAD1Q9H4L7 1026 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 SLC12A6Q9UHW9 1150 aa16.7■□□□□ 0.26
LRFN1-201ENST00000248668 A0A087WUV0 522 aaPredicted RBP16.69■□□□□ 0.26
LRFN1-201ENST00000248668 TNNC2P02585 160 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms