RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 NFX1Q12986 1120 aaKnown RBP15.14■□□□□ 0.01
SDF2-201ENST00000247020 DSC3Q14574 896 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 LPIN1Q14693 890 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 C9orf57Q5W0N0 161 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 SCARA5Q6ZMJ2 495 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 KIAA1257Q9ULG3 409 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 PADI3Q9ULW8 664 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 BARX2Q9UMQ3 279 aaPredicted RBP15.14■□□□□ 0.01
SDF2-201ENST00000247020 POLIQ9UNA4 740 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 TDRD15B5MCY1 1934 aaKnown RBP15.14■□□□□ 0.01
SDF2-201ENST00000247020 PIRO00625 290 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 FAM163BP0C2L3 166 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 C11orf63Q6NUN7 778 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 PHF13Q86YI8 300 aaPredicted RBP15.13■□□□□ 0.01
SDF2-201ENST00000247020 MCOLN2Q8IZK6 566 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 ARHGEF26Q96DR7 871 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 PPP1R10Q96QC0 940 aaKnown RBP15.13■□□□□ 0.01
SDF2-201ENST00000247020 APOL6Q9BWW8 343 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 CARD6Q9BX69 1037 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 TLR10Q9BXR5 811 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 AGO3Q9H9G7 860 aaKnown RBP15.13■□□□□ 0.01
SDF2-201ENST00000247020 UBN1Q9NPG3 1134 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 WBP1LQ9NX94 342 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 GDAP2Q9NXN4 497 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 TUBGCP4Q9UGJ1 667 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 OGDHLQ9ULD0 1010 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 CEP83Q9Y592 693 aa15.13■□□□□ 0.01
SDF2-201ENST00000247020 TADA3O75528 432 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 CKBP12277 381 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 CD52P31358 61 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 CDK7P50613 346 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 GUCY2FP51841 1108 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 C1QBPQ07021 282 aaKnown RBP15.12■□□□□ 0.01
SDF2-201ENST00000247020 STILQ15468 1287 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 ZNF618Q5T7W0 954 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 SH3TC2Q8TF17 1288 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 ZNF653Q96CK0 615 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 PGBD4Q96DM1 585 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 TMEM176AQ96HP8 235 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 OSBPL9Q96SU4 736 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 DNAI2Q9GZS0 605 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 UNC93B1Q9H1C4 597 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 LHX5Q9H2C1 402 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 SMYD3Q9H7B4 428 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 ABCB6Q9NP58 842 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 CTTNBP2NLQ9P2B4 639 aa15.12■□□□□ 0.01
SDF2-201ENST00000247020 A0A0U1RQF3 1178 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 GHRP10912 638 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 VDRP11473 427 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 HSPA6P17066 643 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 TAF6P49848 677 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 RAD23BP54727 409 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 ITIH3Q06033 890 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 SV2CQ496J9 727 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 GLRA4Q5JXX5 417 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 LIN9Q5TKA1 542 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 MON1BQ7L1V2 547 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 DPH6Q7L8W6 267 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 ZNF572Q7Z3I7 529 aaPredicted RBP15.11■□□□□ 0.01
SDF2-201ENST00000247020 DAAM2Q86T65 1068 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 UNC93AQ86WB7 457 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 DNAAF5Q86Y56 855 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 SLC4A11Q8NBS3 891 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 TMEM35BQ8NCS4 154 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 WHAMMQ8TF30 809 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 C18orf25Q96B23 403 aaPredicted RBP15.11■□□□□ 0.01
SDF2-201ENST00000247020 CYFIP2Q96F07 1278 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 RPS6KC1Q96S38 1066 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 SDCBP2Q9H190 292 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 OSGEPQ9NPF4 335 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 LCMT1Q9UIC8 334 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 AMFRQ9UKV5 643 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 TANC1Q9C0D5 1861 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 PTGESO14684 152 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 CAPN15O75808 1086 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 KIF4AO95239 1232 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 CALB1P05937 261 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 PAX3P23760 479 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 BFSP2Q13515 415 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 RPS6KA1Q15418 735 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 NAA35Q5VZE5 725 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 TRAF7Q6Q0C0 670 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 PEX26Q7Z412 305 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 NT5DC3Q86UY8 548 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 ZNF564Q8TBZ8 553 aaPredicted RBP15.11■□□□□ 0.01
SDF2-201ENST00000247020 NT5C1AQ9BXI3 368 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 CXCL16Q9H2A7 254 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 CNOT8Q9UFF9 292 aaKnown RBP15.11■□□□□ 0.01
SDF2-201ENST00000247020 PUF60Q9UHX1 559 aaKnown RBP15.11■□□□□ 0.01
SDF2-201ENST00000247020 STXBP5LQ9Y2K9 1186 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 SCINQ9Y6U3 715 aa15.11■□□□□ 0.01
SDF2-201ENST00000247020 CTAGE15A4D2H0 777 aa15.1■□□□□ 0.01
SDF2-201ENST00000247020 MIF4GDA9UHW6 222 aaKnown RBP15.1■□□□□ 0.01
SDF2-201ENST00000247020 INPPL1O15357 1258 aa15.1■□□□□ 0.01
SDF2-201ENST00000247020 BUB1BO60566 1050 aaPredicted RBP15.1■□□□□ 0.01
SDF2-201ENST00000247020 THP07101 528 aa15.1■□□□□ 0.01
SDF2-201ENST00000247020 CTAGE8P0CG41 777 aa15.1■□□□□ 0.01
SDF2-201ENST00000247020 BRD2P25440 801 aaKnown RBP15.1■□□□□ 0.01
SDF2-201ENST00000247020 RAP1GAPP47736 663 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms