RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 PTK2Q05397 1052 aa20.52■□□□□ 0.88
SBDS-201ENST00000246868 HGSNATQ68CP4 663 aa20.52■□□□□ 0.88
SBDS-201ENST00000246868 CCDC170Q8IYT3 715 aa20.52■□□□□ 0.88
SBDS-201ENST00000246868 APPL2Q8NEU8 664 aa20.52■□□□□ 0.88
SBDS-201ENST00000246868 DNAI2Q9GZS0 605 aa20.52■□□□□ 0.88
SBDS-201ENST00000246868 NHEJ1Q9H9Q4 299 aaPredicted RBP20.52■□□□□ 0.88
SBDS-201ENST00000246868 PCDH10Q9P2E7 1040 aa20.52■□□□□ 0.88
SBDS-201ENST00000246868 ARHGAP20Q9P2F6 1191 aa20.52■□□□□ 0.88
SBDS-201ENST00000246868 SSU72P8A0A1W2PR75 194 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 ARHGEF37A1IGU5 675 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 SOWAHDA6NJG2 315 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 SPTLC1O15269 473 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 CYLC1P35663 651 aaPredicted RBP20.51■□□□□ 0.87
SBDS-201ENST00000246868 RAP1GAPP47736 663 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 PDE6CP51160 858 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 CDH8P55286 799 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 PAN2Q504Q3 1202 aaKnown RBP20.51■□□□□ 0.87
SBDS-201ENST00000246868 TMEM240Q5SV17 173 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 DSTYKQ6XUX3 929 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 DPH6Q7L8W6 267 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 TOP6BLQ8N6T0 577 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 UBR7Q8N806 425 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 RBBP8NLQ8NC74 664 aaPredicted RBP20.51■□□□□ 0.87
SBDS-201ENST00000246868 PAAF1Q9BRP4 392 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 HAUS4Q9H6D7 363 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 CNTN6Q9UQ52 1028 aa20.51■□□□□ 0.87
SBDS-201ENST00000246868 CYB561D2O14569 222 aa20.5■□□□□ 0.87
SBDS-201ENST00000246868 IPO7O95373 1038 aaKnown RBP20.5■□□□□ 0.87
SBDS-201ENST00000246868 ALDH2P05091 517 aa20.5■□□□□ 0.87
SBDS-201ENST00000246868 ANXA13P27216 316 aa20.5■□□□□ 0.87
SBDS-201ENST00000246868 CLCN1P35523 988 aa20.5■□□□□ 0.87
SBDS-201ENST00000246868 EIF4A3P38919 411 aaKnown RBP20.5■□□□□ 0.87
SBDS-201ENST00000246868 MAPK8IP2Q13387 824 aaPredicted RBP20.5■□□□□ 0.87
SBDS-201ENST00000246868 FAM117BQ6P1L5 589 aa20.5■□□□□ 0.87
SBDS-201ENST00000246868 RABGGTAQ92696 567 aa20.5■□□□□ 0.87
SBDS-201ENST00000246868 SENP8Q96LD8 212 aa20.5■□□□□ 0.87
SBDS-201ENST00000246868 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.5■□□□□ 0.87
SBDS-201ENST00000246868 TMEM175Q9BSA9 504 aa20.5■□□□□ 0.87
SBDS-201ENST00000246868 SDCBP2Q9H190 292 aa20.5■□□□□ 0.87
SBDS-201ENST00000246868 NRDE2Q9H7Z3 1164 aa20.5■□□□□ 0.87
SBDS-201ENST00000246868 BARX2Q9UMQ3 279 aaPredicted RBP20.5■□□□□ 0.87
SBDS-201ENST00000246868 AKR1B10O60218 316 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 TACC1O75410 805 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 PLEKP08567 350 aaPredicted RBP20.49■□□□□ 0.87
SBDS-201ENST00000246868 FAM163BP0C2L3 166 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 AARSP49588 968 aaKnown RBP eCLIP20.49■□□□□ 0.87
SBDS-201ENST00000246868 INCA1Q0VD86 236 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 SOWAHAQ2M3V2 549 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 C3orf58Q8NDZ4 430 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 COLEC11Q9BWP8 271 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 DNAJB4Q9UDY4 337 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 TMEM189-UBE2V1I3L0A0 370 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 TRAPPC3O43617 180 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 B4GALT3O60512 393 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 CILPO75339 1184 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 EPHB4P54760 987 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 SLC47A2Q86VL8 602 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 HERVK_113Q902F9 699 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 YME1L1Q96TA2 773 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.49■□□□□ 0.87
SBDS-201ENST00000246868 SNX25Q9H3E2 840 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 L1RE1Q9UN81 338 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 ZKSCAN5Q9Y2L8 839 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 FAN1Q9Y2M0 1017 aa20.49■□□□□ 0.87
SBDS-201ENST00000246868 PRG3Q9Y2Y8 225 aaPredicted RBP20.49■□□□□ 0.87
SBDS-201ENST00000246868 KIF4AO95239 1232 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 ODC1P11926 461 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 CYP11B1P15538 503 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 GNA15P30679 374 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 ZNF132P52740 706 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 ZNF394Q53GI3 561 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 ZNF571Q7Z3V5 609 aaPredicted RBP20.48■□□□□ 0.87
SBDS-201ENST00000246868 CMTR2Q8IYT2 770 aaKnown RBP20.48■□□□□ 0.87
SBDS-201ENST00000246868 ADGRF2Q8IZF7 708 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 TMEM86AQ8N2M4 240 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 OR6B3Q8NGW1 331 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 HASPINQ8TF76 798 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 ZNF689Q96CS4 500 aaPredicted RBP20.48■□□□□ 0.87
SBDS-201ENST00000246868 NT5C1AQ9BXI3 368 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 PUF60Q9UHX1 559 aaKnown RBP20.48■□□□□ 0.87
SBDS-201ENST00000246868 DSEQ9UL01 958 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 EPN1Q9Y6I3 576 aaPredicted RBP20.48■□□□□ 0.87
SBDS-201ENST00000246868 SLC4A7Q9Y6M7 1214 aa20.48■□□□□ 0.87
SBDS-201ENST00000246868 CARNS1A5YM72 827 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 NRP1O14786 923 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 TADA2AO75478 443 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 NDUFA10O95299 355 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 PAEPP09466 180 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 ALDH7A1P49419 539 aaKnown RBP20.47■□□□□ 0.87
SBDS-201ENST00000246868 KIF11P52732 1056 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 NDST1P52848 882 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 BTG3Q14201 252 aaPredicted RBP20.47■□□□□ 0.87
SBDS-201ENST00000246868 TIGD5Q53EQ6 642 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 SPOUT1Q5T280 376 aaKnown RBP20.47■□□□□ 0.87
SBDS-201ENST00000246868 RAD9BQ6WBX8 426 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 LIMS2Q7Z4I7 341 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 UNC93AQ86WB7 457 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 ZNF677Q86XU0 584 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 PDCL2Q8N4E4 241 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 EPS8L1Q8TE68 723 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms