RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 HIBCHQ6NVY1 386 aaPredicted RBP22.93■■□□□ 1.26
SH2D3A-201ENST00000245908 FAM212AQ96EL1 285 aa22.93■■□□□ 1.26
SH2D3A-201ENST00000245908 FOXP3Q9BZS1 431 aa22.93■■□□□ 1.26
SH2D3A-201ENST00000245908 HOXC10Q9NYD6 342 aa22.93■■□□□ 1.26
SH2D3A-201ENST00000245908 BRCA1P38398 1863 aaKnown RBP22.93■■□□□ 1.26
SH2D3A-201ENST00000245908 GSTA1P08263 222 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 ELF1P32519 619 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 CETN2P41208 172 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 SSR1P43307 286 aaKnown RBP22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 LMNB2Q03252 620 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 CAPSQ13938 189 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 TARBP2Q15633 366 aaKnown RBP22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 WLSQ5T9L3 541 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 BRSK2Q8IWQ3 736 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 DYDC1Q8WWB3 177 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 CD248Q9HCU0 757 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 TMEM191CA6NGB0 347 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 ADCY3O60266 1144 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 ATP2C2O75185 946 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 OAS1P00973 400 aaKnown RBP22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 TMEM191BP0C7N4 346 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 AP3M2P53677 418 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 FSTL1Q12841 308 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 RCOR2Q8IZ40 523 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 FUKQ8N0W3 1084 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 RBM41Q96IZ5 413 aaKnown RBP22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 IMPG2Q9BZV3 1241 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 HAUS2Q9NVX0 235 aa22.92■■□□□ 1.26
SH2D3A-201ENST00000245908 SNX3O60493 162 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 ASS1P00966 412 aaKnown RBP22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 LRRC14Q15048 493 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 PRAMEF18Q5VWM3 479 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 CEP128Q6ZU80 1094 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 CHST13Q8NET6 341 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 PCYT2Q99447 389 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 WDR90Q96KV7 1748 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 LIASO43766 372 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 RPL7AP62424 266 aaKnown RBP22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 CNTN2Q02246 1040 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 GRM1Q13255 1194 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 STAT4Q14765 748 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 SEZ6Q53EL9 994 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 DRICH1Q6PGQ1 229 aaPredicted RBP22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 ZPBP2Q6X784 338 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 SEPT14Q6ZU15 432 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 ZCCHC9Q8N567 271 aaKnown RBP22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 MGARPQ8TDB4 240 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 SLITRK1Q96PX8 696 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 SLC12A4Q9UP95 1085 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 GJA3Q9Y6H8 435 aa22.91■■□□□ 1.26
SH2D3A-201ENST00000245908 GSTTP1A0A1W2PQM5 241 aa22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 TCRBV5S1A1TA0A578 114 aa22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 CDH16O75309 829 aa22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 LSM8O95777 96 aaKnown RBP22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 CALB1P05937 261 aa22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 ABHD2P08910 425 aa22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 LRRC38Q5VT99 294 aa22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 SCARA3Q6AZY7 606 aa22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 GSTA5Q7RTV2 222 aa22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 WDR49Q8IV35 697 aa22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 CCHCR1Q8TD31 782 aa22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 SGSM3Q96HU1 749 aa22.9■■□□□ 1.26
SH2D3A-201ENST00000245908 FAM189A1O60320 539 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 CETPP11597 493 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 HARSP12081 509 aaKnown RBP22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 UBA1P22314 1058 aaKnown RBP22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 MCL1Q07820 350 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 ZNF252P-AS1Q0IIN9 211 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 ATP13A4Q4VNC1 1196 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 CYB5D1Q6P9G0 228 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 TRPM8Q7Z2W7 1104 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 APOBEC3FQ8IUX4 373 aaKnown RBP22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 CYP4X1Q8N118 509 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 CKAP2Q8WWK9 683 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 KLRG1Q96E93 195 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 CCDC77Q9BR77 488 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 NRBP2Q9NSY0 501 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 EURLQ9NYK6 297 aa22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.89■■□□□ 1.26
SH2D3A-201ENST00000245908 CST3P01034 146 aaPredicted RBP22.89■■□□□ 1.25
SH2D3A-201ENST00000245908 MYCNP04198 464 aaPredicted RBP22.89■■□□□ 1.25
SH2D3A-201ENST00000245908 BRAFP15056 766 aa22.89■■□□□ 1.25
SH2D3A-201ENST00000245908 ALDH5A1P51649 535 aaPredicted RBP22.89■■□□□ 1.25
SH2D3A-201ENST00000245908 P3H1Q32P28 736 aa22.89■■□□□ 1.25
SH2D3A-201ENST00000245908 KCNK9Q9NPC2 374 aa22.89■■□□□ 1.25
SH2D3A-201ENST00000245908 KLHL11Q9NVR0 708 aa22.89■■□□□ 1.25
SH2D3A-201ENST00000245908 ACTL7BQ9Y614 415 aa22.89■■□□□ 1.25
SH2D3A-201ENST00000245908 TCP11X1B4DZS4 312 aa22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 PI4K2BG5E9Z4 385 aa22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 FARP2O94887 1054 aaPredicted RBP22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 KRT1P04264 644 aa22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 TCF4P15884 667 aa22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 NF2P35240 595 aa22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 EAPPQ56P03 285 aaPredicted RBP22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 ANGEL2Q5VTE6 544 aaKnown RBP22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 PRUNE1Q86TP1 453 aa22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 C9orf72Q96LT7 481 aa22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 DNPEPQ9ULA0 475 aa22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 NAALADL1Q9UQQ1 740 aa22.88■■□□□ 1.25
SH2D3A-201ENST00000245908 AFG3L2Q9Y4W6 797 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms