RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 EXD1Q8NHP7 514 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 DHX33Q9H6R0 707 aaKnown RBP15.26■□□□□ 0.03
HIF3A-202ENST00000244303 KCNK9Q9NPC2 374 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 MAFBQ9Y5Q3 323 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-202ENST00000244303 LOC285556D6RIA3 1793 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 CNTNAP2Q9UHC6 1331 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 LDHAP00338 332 aaKnown RBP15.25■□□□□ 0.03
HIF3A-202ENST00000244303 CETPP11597 493 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 ATP13A4Q4VNC1 1196 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 DLK2Q6UY11 383 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 CYP4X1Q8N118 509 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 GIMAP7Q8NHV1 300 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 FEZF2Q8TBJ5 459 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 SGSM3Q96HU1 749 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 MAF1Q9H063 256 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.25■□□□□ 0.03
HIF3A-202ENST00000244303 TBK1Q9UHD2 729 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 CNTN6Q9UQ52 1028 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 SNCAIPQ9Y6H5 919 aa15.25■□□□□ 0.03
HIF3A-202ENST00000244303 A0A0B4J269 797 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 TCP11X1B4DZS4 312 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 SNX3O60493 162 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 HARSP12081 509 aaKnown RBP15.24■□□□□ 0.03
HIF3A-202ENST00000244303 TCF4P15884 667 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 TBXAS1P24557 533 aaPredicted RBP15.24■□□□□ 0.03
HIF3A-202ENST00000244303 KLRC2P26717 231 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 ARL2P36404 184 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 RPL7AP62424 266 aaKnown RBP15.24■□□□□ 0.03
HIF3A-202ENST00000244303 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
HIF3A-202ENST00000244303 GSTA5Q7RTV2 222 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 TRPM8Q7Z2W7 1104 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 C9orf72Q96LT7 481 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 PARVAQ9NVD7 372 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 FGFR1OP2Q9NVK5 253 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 SLC12A4Q9UP95 1085 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 ADGRA2Q96PE1 1338 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 PI4K2BG5E9Z4 385 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 TCEA3O75764 348 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 OAS1P00973 400 aaKnown RBP15.24■□□□□ 0.03
HIF3A-202ENST00000244303 GH1P01241 217 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 KRT10P13645 584 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 BRAFP15056 766 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 NF2P35240 595 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 FSTL1Q12841 308 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 NCOA4Q13772 614 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 VGLL4Q14135 290 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 MPP2Q14168 576 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 P3H1Q32P28 736 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 KAZNQ674X7 775 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 PARP9Q8IXQ6 854 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 BBOF1Q8ND07 529 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 CHST13Q8NET6 341 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 SLC7A3Q8WY07 619 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 ABCF3Q9NUQ8 709 aa15.24■□□□□ 0.03
HIF3A-202ENST00000244303 PEX10O60683 326 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 ATG7O95352 703 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 CNTN2Q02246 1040 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 NFX1Q12986 1120 aaKnown RBP15.23■□□□□ 0.03
HIF3A-202ENST00000244303 STXBP2Q15833 593 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 TREML2Q5T2D2 321 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 ZFYVE27Q5T4F4 411 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 HIBCHQ6NVY1 386 aaPredicted RBP15.23■□□□□ 0.03
HIF3A-202ENST00000244303 GDAP1Q8TB36 358 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 ZNF606Q8WXB4 792 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 KCNN1Q92952 543 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 FAM212AQ96EL1 285 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 POLR2AP24928 1970 aaKnown RBP15.23■□□□□ 0.03
HIF3A-202ENST00000244303 GSTA1P08263 222 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 ADCY1Q08828 1119 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 FAM133BQ5BKY9 247 aaKnown RBP15.23■□□□□ 0.03
HIF3A-202ENST00000244303 NUGGCQ68CJ6 796 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 SEPT14Q6ZU15 432 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 ANKRD35Q8N283 1001 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 GLIS1Q8NBF1 620 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 IP6K2Q9UHH9 426 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 LGALS13Q9UHV8 139 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 NAALADL1Q9UQQ1 740 aa15.23■□□□□ 0.03
HIF3A-202ENST00000244303 GSTTP1A0A1W2PQM5 241 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 LIASO43766 372 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 CDH16O75309 829 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 CST3P01034 146 aaPredicted RBP15.22■□□□□ 0.03
HIF3A-202ENST00000244303 ATF7P17544 494 aaPredicted RBP15.22■□□□□ 0.03
HIF3A-202ENST00000244303 IBSPP21815 317 aaPredicted RBP15.22■□□□□ 0.03
HIF3A-202ENST00000244303 MMP8P22894 467 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 ICAM3P32942 547 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 TNFSF9P41273 254 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 ZNF252P-AS1Q0IIN9 211 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 SNCBQ16143 134 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 RELL1Q8IUW5 271 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 SRRM1Q8IYB3 904 aaKnown RBP15.22■□□□□ 0.03
HIF3A-202ENST00000244303 DNERQ8NFT8 737 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 CKAP2Q8WWK9 683 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 SLITRK1Q96PX8 696 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 RBM15Q96T37 977 aaKnown RBP eCLIP15.22■□□□□ 0.03
HIF3A-202ENST00000244303 FHDC1Q9C0D6 1143 aaPredicted RBP15.22■□□□□ 0.03
HIF3A-202ENST00000244303 GGT7Q9UJ14 662 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 DNPEPQ9ULA0 475 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 USP15Q9Y4E8 981 aaPredicted RBP15.22■□□□□ 0.03
HIF3A-202ENST00000244303 MGAMO43451 1857 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms