RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 A0A087WZ62 844 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 TRIM49BA6NDI0 452 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 PES1O00541 588 aaKnown RBP10□□□□□ -0.81
TGFB3-201ENST00000238682 ABLIM1O14639 778 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 LPXNO60711 386 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 CHRNA1P02708 482 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 AFPP02771 609 aaKnown RBP10□□□□□ -0.81
TGFB3-201ENST00000238682 SRGAP2CP0DJJ0 459 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 PBX1P40424 430 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 GRM5P41594 1212 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 BFSP1Q12934 665 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 JAMLQ86YT9 394 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 BRSK2Q8IWQ3 736 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 TRAPPC12Q8WVT3 735 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 POMGNT1Q8WZA1 660 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 WNT8BQ93098 351 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 JAKMIP2Q96AA8 810 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 PABPC5Q96DU9 382 aaKnown RBP10□□□□□ -0.81
TGFB3-201ENST00000238682 NLRP4Q96MN2 994 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 FDXACB1Q9BRP7 624 aaPredicted RBP10□□□□□ -0.81
TGFB3-201ENST00000238682 ERVK-5Q9HDB9 667 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 PLCB1Q9NQ66 1216 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 INO80B-WBP1J3KQ70 363 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 TSPAN1O60635 241 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 IMPDH2P12268 514 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 BMPR1AP36894 532 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 CHMP4BP1P59074 171 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 SIM2Q14190 667 aaPredicted RBP10□□□□□ -0.81
TGFB3-201ENST00000238682 RUFY4Q6ZNE9 571 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 VSTM4Q8IW00 320 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 GLIS3Q8NEA6 775 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 CCDC26Q8TAB7 109 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 LRRN4Q8WUT4 740 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 EPAS1Q99814 870 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 MSTO1Q9BUK6 570 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 NDST4Q9H3R1 872 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 PPCSQ9HAB8 311 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 INTS13Q9NVM9 706 aa10□□□□□ -0.81
TGFB3-201ENST00000238682 PTPRSQ13332 1948 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 KIF2AO00139 706 aaPredicted RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 ENPP3O14638 875 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 XPOTO43592 962 aaKnown RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 BMP1P13497 986 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 PPM1AP35813 382 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 VAMP7P51809 220 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 ZNF200P98182 395 aaPredicted RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 CYP24A1Q07973 514 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 TMED1Q13445 227 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 DRP2Q13474 957 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 GPM6BQ13491 265 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 SNRNP35Q16560 246 aaKnown RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 EPC2Q52LR7 807 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 SPECC1LQ69YQ0 1117 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 SLC39A4Q6P5W5 647 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 WDR49Q8IV35 697 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 CCDC150Q8NCX0 1101 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 DNAJB3Q8WWF6 145 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 TAF4BQ92750 862 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 MIEF2Q96C03 454 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 SCLT1Q96NL6 688 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 UBE2ZQ9H832 354 aaPredicted RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 PRM3Q9NNZ6 103 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 RGS18Q9NS28 235 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 SPATS2LQ9NUQ6 558 aaKnown RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 CPSF3Q9UKF6 684 aaKnown RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 COQ4Q9Y3A0 265 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 TRIOBPQ9H2D6 2365 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 INPPL1O15357 1258 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 ZNF623O75123 536 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 DGKIO75912 1065 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 AKAP3O75969 853 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 C1RP00736 705 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 LAG3P18627 525 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 ANXA13P27216 316 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 CDKN1CP49918 316 aaPredicted RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 FAM189BP81408 668 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 CCZ1BP86790 482 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 CCZ1P86791 482 aaPredicted RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 ENOSF1Q7L5Y1 443 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 CATSPER4Q7RTX7 472 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 CGRRF1Q99675 332 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 SH2D3AQ9BRG2 576 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 MRPL9Q9BYD2 267 aaKnown RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 MUC3BQ9H195 1237 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 PDZD7Q9H5P4 517 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 TMEM8AQ9HCN3 771 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 TOPORSQ9NS56 1045 aaPredicted RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 CPSF2Q9P2I0 782 aaKnown RBP9.99□□□□□ -0.81
TGFB3-201ENST00000238682 SUN2Q9UH99 717 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 LRFN2Q9ULH4 789 aa9.99□□□□□ -0.81
TGFB3-201ENST00000238682 SCN5AQ14524 2016 aa9.98□□□□□ -0.81
TGFB3-201ENST00000238682 PRMT3O60678 531 aa9.98□□□□□ -0.81
TGFB3-201ENST00000238682 RPS6KA5O75582 802 aa9.98□□□□□ -0.81
TGFB3-201ENST00000238682 STAU1O95793 577 aaKnown RBP9.98□□□□□ -0.81
TGFB3-201ENST00000238682 VTNP04004 478 aa9.98□□□□□ -0.81
TGFB3-201ENST00000238682 TNNT1P13805 278 aa9.98□□□□□ -0.81
TGFB3-201ENST00000238682 ADSSP30520 456 aa9.98□□□□□ -0.81
TGFB3-201ENST00000238682 RDXP35241 583 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms