RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 C16orf96A6NNT2 1141 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 DAB1O75553 588 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 WDR47O94967 919 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 RFC5P40937 340 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 UBE3AQ05086 875 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 AGGF1Q8N302 714 aaeCLIP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 ZCWPW1Q9H0M4 648 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 PPCSQ9HAB8 311 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 KDM6AO15550 1401 aaPredicted RBP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 EIF3HO15372 352 aaKnown RBP eCLIP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 TMEM62Q0P6H9 643 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 TBC1D16Q8TBP0 767 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 SEPT1Q8WYJ6 367 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 CMTM5Q96DZ9 223 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 IL17RAQ96F46 866 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 VIPAS39Q9H9C1 493 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 TULP4Q9NRJ4 1543 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 WEE2P0C1S8 567 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 SPRP35270 261 aaPredicted RBP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 ACADSBP45954 432 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 KCNJ6P48051 423 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 GOLGA7BQ2TAP0 167 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 ZC2HC1CQ53FD0 456 aaPredicted RBP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 IER5Q5VY09 327 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 PLA2G4FQ68DD2 849 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 PRUNE1Q86TP1 453 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 MICALL2Q8IY33 904 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 PCYOX1LQ8NBM8 494 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 STKLD1Q8NE28 680 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 SYNDIG1Q9H7V2 258 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 ATP11BQ9Y2G3 1177 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 DYNC1LI2O43237 492 aaPredicted RBP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 KLHL2O95198 593 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 FKBP9O95302 570 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 NDUFB10O96000 172 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 ITGA4P13612 1032 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 NLRP11P59045 1033 aaKnown RBP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 AGBL2Q5U5Z8 902 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 FKBP9P1Q75LS8 142 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 RIN2Q8WYP3 895 aaPredicted RBP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 SRPK1Q96SB4 655 aaKnown RBP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 KCNK16Q96T55 309 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 NT5C1AQ9BXI3 368 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 SENP2Q9HC62 589 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 NBPF26B4DH59 902 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 POLBP06746 335 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 ATXN3P54252 364 aaPredicted RBP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 PRKCEQ02156 737 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 ATF7IP2Q5U623 682 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 PTRHD1Q6GMV3 140 aaKnown RBP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 RAD9BQ6WBX8 426 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 NBPF15Q8N660 670 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 CALML6Q8TD86 181 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 EME1Q96AY2 570 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 THAP11Q96EK4 314 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 SGSM3Q96HU1 749 aa12.08□□□□□ -0.48
LAMA4-201ENST00000230538 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.08□□□□□ -0.48
LAMA4-201ENST00000230538 DEAF1O75398 565 aaPredicted RBP12.07□□□□□ -0.48
LAMA4-201ENST00000230538 GPD1P21695 349 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 PDK1Q15118 436 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 CCNI2Q6ZMN8 369 aaPredicted RBP12.07□□□□□ -0.48
LAMA4-201ENST00000230538 C3orf62Q6ZUJ4 267 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 SPATA18Q8TC71 538 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 SEC16BQ96JE7 1060 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 CCT8L2Q96SF2 557 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 ASCC2Q9H1I8 757 aaPredicted RBP12.07□□□□□ -0.48
LAMA4-201ENST00000230538 FAM49BQ9NUQ9 324 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 SLC38A7Q9NVC3 462 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.07□□□□□ -0.48
LAMA4-201ENST00000230538 TFR2Q9UP52 801 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 A0A0G2JLW4 131 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 IQCA1LA6NCM1 817 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 KBTBD13C9JR72 458 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 PRRG1O14668 218 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 AIM2O14862 343 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 ARL4DP49703 201 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 DEPDC1Q5TB30 811 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 POTEAQ6S8J7 498 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 TRAPPC11Q7Z392 1133 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 TC2NQ8N9U0 490 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 ZNF280CQ8ND82 737 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 ZNF512Q96ME7 567 aaPredicted RBP12.07□□□□□ -0.48
LAMA4-201ENST00000230538 TMEM8AQ9HCN3 771 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 PDS5AQ29RF7 1337 aaKnown RBP12.07□□□□□ -0.48
LAMA4-201ENST00000230538 RNF17Q9BXT8 1623 aaKnown RBP12.07□□□□□ -0.48
LAMA4-201ENST00000230538 C19orf81C9J6K1 198 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 MAGEB2O15479 319 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 HLA-DRAP01903 254 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 COMTP21964 271 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 SBK1Q52WX2 424 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 STRIP1Q5VSL9 837 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 SCFD2Q8WU76 684 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 BTN2A2Q8WVV5 523 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 TNS3Q68CZ2 1445 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 KRT87PA6NCN2 255 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 EIF3DO15371 548 aaKnown RBP eCLIP12.07□□□□□ -0.48
LAMA4-201ENST00000230538 ADCY3O60266 1144 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 RALBP11234 206 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 CHRNA5P30532 468 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms