RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 ZDHHC14Q8IZN3 488 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 ZNF513Q8N8E2 541 aaPredicted RBP15.3■□□□□ 0.04
PRDM4-201ENST00000228437 ICA1LQ8NDH6 482 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 TAS1R2Q8TE23 839 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 MORC4Q8TE76 937 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 SENP7Q9BQF6 1050 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 NFAT5O94916 1531 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 KDM3BQ7LBC6 1761 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 GSC2O15499 205 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 KRT19P08727 400 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 TCN1P20061 433 aaPredicted RBP15.3■□□□□ 0.04
PRDM4-201ENST00000228437 POU5F1Q01860 360 aaKnown RBP15.3■□□□□ 0.04
PRDM4-201ENST00000228437 BMPR2Q13873 1038 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 ACAP1Q15027 740 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 CHI3L2Q15782 390 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 PARP6Q2NL67 630 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 KRT39Q6A163 491 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 MFSD5Q6N075 450 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 CNBD2Q96M20 576 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 PRM3Q9NNZ6 103 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 EXOC7Q9UPT5 735 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 FIS1Q9Y3D6 152 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 F5H6K3 240 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 MAP3K13O43283 966 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 ADCY3O60266 1144 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 PYGBP11216 843 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 AQP5P55064 265 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 CDO1Q16878 200 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 SPDYCQ5MJ68 293 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 TCHHL1Q5QJ38 904 aaPredicted RBP15.3■□□□□ 0.04
PRDM4-201ENST00000228437 FAM81BQ96LP2 452 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 FAM20AQ96MK3 541 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 PCMTD2Q9NV79 361 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 WDR35Q9P2L0 1181 aa15.3■□□□□ 0.04
PRDM4-201ENST00000228437 NWD2Q9ULI1 1742 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 XPO1O14980 1071 aaKnown RBP15.29■□□□□ 0.04
PRDM4-201ENST00000228437 PPP1R11O60927 126 aaPredicted RBP15.29■□□□□ 0.04
PRDM4-201ENST00000228437 TRABD2AQ86V40 505 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 FBXO36Q8NEA4 188 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 EPS8L1Q8TE68 723 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 TMEM206Q9H813 350 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 A6NJR5 290 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 WDR64B1ANS9 1081 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 LIN7AO14910 233 aaPredicted RBP15.29■□□□□ 0.04
PRDM4-201ENST00000228437 LIG4P49917 911 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 PDE1BQ01064 536 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 MAPK6Q16659 721 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 SGSM1Q2NKQ1 1148 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 LPCAT4Q643R3 524 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 PPP4R1Q8TF05 950 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 SH3TC2Q8TF17 1288 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 ATXN7L3BQ96GX2 97 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 ZNF333Q96JL9 665 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 PHF12Q96QT6 1004 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 MRPL47Q9HD33 250 aaKnown RBP15.29■□□□□ 0.04
PRDM4-201ENST00000228437 BAZ2AQ9UIF9 1905 aaKnown RBP15.29■□□□□ 0.04
PRDM4-201ENST00000228437 PIK3R2O00459 728 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 HIRAP54198 1017 aaPredicted RBP15.29■□□□□ 0.04
PRDM4-201ENST00000228437 GEMIN4P57678 1058 aaKnown RBP15.29■□□□□ 0.04
PRDM4-201ENST00000228437 ACBD5Q5T8D3 534 aaPredicted RBP15.29■□□□□ 0.04
PRDM4-201ENST00000228437 SYDE2Q5VT97 1194 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 SPOPLQ6IQ16 392 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 RINLQ6ZS11 566 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 BRINP3Q76B58 766 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 ZNF720Q7Z2F6 126 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 TRIM74Q86UV6 250 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 TRIM73Q86UV7 250 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 CCDC33Q8N5R6 958 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 FBXL13Q8NEE6 735 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 RBM41Q96IZ5 413 aaKnown RBP15.29■□□□□ 0.04
PRDM4-201ENST00000228437 LRGUKQ96M69 825 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 GCNAQ96QF7 691 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 SENP1Q9P0U3 644 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 NCANO14594 1321 aa15.29■□□□□ 0.04
PRDM4-201ENST00000228437 DGKIO75912 1065 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 YARSP54577 528 aaKnown RBP15.28■□□□□ 0.04
PRDM4-201ENST00000228437 SLC25A3Q00325 362 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 SHROOM1Q2M3G4 852 aaPredicted RBP15.28■□□□□ 0.04
PRDM4-201ENST00000228437 GALNTL6Q49A17 601 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 ZBTB46Q86UZ6 589 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 RNF148Q8N7C7 305 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 FAF2Q96CS3 445 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 MECRQ9BV79 373 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 KMT5AQ9NQR1 393 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 MTO1Q9Y2Z2 717 aaKnown RBP15.28■□□□□ 0.04
PRDM4-201ENST00000228437 HEY1Q9Y5J3 304 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 TRIM49D1C9J1S8 452 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 ZMPSTE24O75844 475 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 NPTXRO95502 500 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 LYNP07948 512 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 PDK4Q16654 411 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 RICTORQ6R327 1708 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 DENND3A2RUS2 1198 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 PRELPP51888 382 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 NFX1Q12986 1120 aaKnown RBP15.28■□□□□ 0.04
PRDM4-201ENST00000228437 CNGA3Q16281 694 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 SLC45A4Q5BKX6 768 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 RIPOR1Q6ZS17 1223 aa15.28■□□□□ 0.04
PRDM4-201ENST00000228437 APOBEC2Q9Y235 224 aaKnown RBP15.28■□□□□ 0.04
PRDM4-201ENST00000228437 MED1Q15648 1581 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms